Accession
MI0000757
Description
Caenorhabditis elegans
cel-mir-358 precursor miRNA
Gene family
MIPF0000226;
mir-358
Sequence
348
reads,
29
reads per million, 11 experiments
aaacucgcgacggcuggcgACCUGGCCAGGCAUUCCAACUGUcaaacuuacaaagcuuucucgacaAUUGGUAUCCCUGUCAAGGUCUcaauccguucagcgaauucguu
....(((((((((.(((.((((((((.(((.((.((((.((((...................)))).)))).)).)))))).))))))))..)))))..)))).......
....(((((((((.(((.((((((((.(((.((.((((.((((...................)))).)))).)).)))))).))))))))..)))))..)))).......
Structure
---aaac -- -c c - C C U C aaacuuac
ucgc gacgg ugg gACCU GGC AGG AU CCAA UGUc a
|||| ||||| ||| ||||| ||| ||| || |||| |||| a
agcg uugcc acU CUGGA CUG UCC UA GGUU acag a
uugcuua ac ua - A - C U A cucuuucg
Annotation confidence
High
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Comments
This miRNA was predicted by computational analysis of C. elegans and C. briggsae, and expression of the mature microRNA confirmed by PCR amplification, cloning and sequencing [1]. The extents of the dominant mature miRNA species are adjusted here in accordance with a large scale cloning and sequencing study [2].
Genome context
chrV: 8580858-8580967 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from cel-mir-358
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature cel-miR-358-5p
| Accession | MIMAT0015120 |
| Description | Caenorhabditis elegans cel-miR-358-5p mature miRNA |
| Sequence | 20 - ACCUGGCCAGGCAUUCCAACUGU - 42 |
| Evidence |
experimental
CLIPseq [4], Illumina [5] |
| Database links |
|
Mature cel-miR-358-3p
| Accession | MIMAT0000700 |
| Description | Caenorhabditis elegans cel-miR-358-3p mature miRNA |
| Sequence | 67 - AUUGGUAUCCCUGUCAAGGUCU - 88 |
| Evidence |
experimental
cloned [1-2], PCR [1], Illumina [3,5], CLIPseq [4] |
| Database links |
|
| Predicted targets |
|
