Accession
MI0001068
Description
Epstein Barr virus
ebv-mir-BART2 precursor miRNA
Sequence
acUAUUUUCUGCAUUCGCCCUUGCguguccauuguugcAAGGAGCGAUUUGGAGAAAAUAAA
..((((((((.((.(((((((((((..........))))))).))))..)).))))))))..
..((((((((.((.(((((((((((..........))))))).))))..)).))))))))..
Structure
ac G -U - uguc UAUUUUCU CA UCGC CCUUGCg c |||||||| || |||| ||||||| AUAAAAGA GU AGCG GGAAcgu a AA G UU A uguu
Annotation confidence
Not enough data
Do you think this miRNA is real?
Comments
Pfeffer et al. cloned 5 miRNAs from a Burkitt's lymphoma cell line (BL41) infected with the B95-8 strain of Epstein-Barr virus [1]. They were all confirmed by Northern blot. The mature miRNA names reflect cloning frequencies from Landgraf et al. [2], and may differ subtly from previous annotations.
Genome context
HHV507799: 152745-152806 [+]
Clustered miRNAs
13 other miRNAs are < 10 kb from ebv-mir-BART2
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Disease association
ebv-mir-BART2 is associated with one or more human diseases in the Human microRNA Disease Database
| Disease | Description | Category | PubMed ID |
|---|
Database links
Mature ebv-miR-BART2-5p
| Accession | MIMAT0001000 |
| Description | Epstein Barr virus ebv-miR-BART2-5p mature miRNA |
| Sequence | 3 - UAUUUUCUGCAUUCGCCCUUGC - 24 |
| Evidence |
experimental
cloned [1-2], Northern [1] |
Mature ebv-miR-BART2-3p
| Accession | MIMAT0004744 |
| Description | Epstein Barr virus ebv-miR-BART2-3p mature miRNA |
| Sequence | 39 - AAGGAGCGAUUUGGAGAAAAUAAA - 62 |
| Evidence |
experimental
cloned [2] |
References
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