miRBase entry: gga-let-7i

Stem-loop gga-let-7i


Accession
MI0001168
Description
Gallus gallus gga-let-7i precursor miRNA
Gene family
MIPF0000002; let-7

Literature search
49 open access papers mention gga-let-7i
(235 sentences)

Sequence

51500 reads, 753 reads per million, 5 experiments
cuggcUGAGGUAGUAGUUUGUGCUGUuggucggguugugacauugcccgcuguggagauaacugcgcaagcuacugccuugcua
.((((.(((((((((((((((((.(((((.(((((.........)))))))........))).)))))))))))))))))))))

Structure
c    U                 U   --------  u     ugu 
 uggc GAGGUAGUAGUUUGUGC GUu        gg cgggu   g
 |||| ||||||||||||||||| |||        || |||||   a
 aucg uuccgucaucgaacgcg caa        uc gcccg   c
-    -                 u   uagaggug  -     uua 


Annotation confidence High
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Genome context
chr1: 33060797-33060880 [+]

Database links

Mature gga-let-7i

Accession MIMAT0001098
Description Gallus gallus gga-let-7i mature miRNA
Sequence 6 - UGAGGUAGUAGUUUGUGCUGU - 26
Evidence experimental
cloned [2]
Database links
Predicted targets

References

  1. PubMed ID: 15592404
    Sequence and comparative analysis of the chicken genome provide unique perspectives on vertebrate evolution
    "International Chicken Genome Sequencing Consortium"
    "Nature (2004) 432:695-716

  2. PubMed ID: 18256158
    MicroRNA profile of Marek's disease virus-transformed T-cell line MSB-1: predominance of virus-encoded microRNAs
    "Yao Y, Zhao Y, Xu H, Smith LP, Lawrie CH, Watson M, Nair V"
    "J Virol (2008) 82:4007-4015


  3. "McBride D, Carre W, Law A, Clinton M"
    (None) None: