Stem-loop gga-mir-30a

Accession

MI0001204

Description

Gallus gallus gga-mir-30a precursor miRNA

Literature search

27 open access papers mention gga-mir-30a
(72 sentences)

Sequence

1597416 reads, 21097 reads per million, 5 experiments

gcgacUGUAAACAUCCUCGACUGGAAGcugugaagcagcagauggggCUUUCAGUCGGAUGUUUGCAGCugc
(((.((((((((((((..(((((((((((.(............).))))))))))))))))))))))).)))

Structure

   a            UC           g gaagc 
gcg cUGUAAACAUCC  GACUGGAAGcu u     a
||| ||||||||||||  ||||||||||| |      
cgu GACGUUUGUAGG  CUGACUUUCgg g     g
   C            --           g uagac 

Annotation confidence High

Genome context

chr3: 82629084-82629155 [+]

Mature gga-miR-30a-5p

• Accession: MIMAT0001135
• Description: Gallus gallus gga-miR-30a-5p mature miRNA
• Sequence: 6 - UGUAAACAUCCUCGACUGGAAG - 27
• Evidence: experimental ; cloned [2]

Mature gga-miR-30a-3p

• Accession: MIMAT0001136
• Description: Gallus gallus gga-miR-30a-3p mature miRNA
• Sequence: 48 - CUUUCAGUCGGAUGUUUGCAGC - 69
• Evidence: not_experimental

References

1. PubMed ID: 15592404
   Sequence and comparative analysis of the chicken genome provide unique perspectives on vertebrate evolution
   "International Chicken Genome Sequencing Consortium"
   "Nature (2004) 432:695-716


2. PubMed ID: 18256158
   MicroRNA profile of Marek's disease virus-transformed T-cell line MSB-1: predominance of virus-encoded microRNAs
   "Yao Y, Zhao Y, Xu H, Smith LP, Lawrie CH, Watson M, Nair V"
   "J Virol (2008) 82:4007-4015


3. 
   "McBride D, Carre W, Law A, Clinton M"
   (None) None: