Stem-loop gga-mir-103-2

Accession

MI0001213

Description

Gallus gallus gga-mir-103-2 precursor miRNA mir-103

Gene
family

RF00129; mir-103

Literature search

8 open access papers mention gga-mir-103-2
(86 sentences)

Sequence

455618 reads, 6006 reads per million, 5 experiments

ucucugugcuuucAGCUUCUUUACAGUGCUGCCUUGuugcguucaugucaAGCAGCAUUGUACAGGGCUAUGAaagaacagag
.((((((.(((((((((.((.(((((((((((.(((..((......)))))))))))))))).)))))..)))))).))))))

Structure

u      g      --   U  U           C   uu  gu 
 cucugu cuuucA  GCU CU UACAGUGCUGC UUG  gc  u
 |||||| ||||||  ||| || ||||||||||| |||  ||   
 gagaca gaaAGU  CGG GA AUGUUACGACG Aac  ug  c
-      a      AU   -  C           -   --  ua 

Annotation confidence Medium

Genome context

chr4: 89095068-89095150 [-]

Mature gga-miR-103-3p

• Accession: MIMAT0001145
• Description: Gallus gallus gga-miR-103-3p mature miRNA
• Sequence: 51 - AGCAGCAUUGUACAGGGCUAUGA - 73
• Evidence: experimental ; Illumina [2]

Mature gga-miR-103-2-5p

• Accession: MIMAT0026519
• Description: Gallus gallus gga-miR-103-2-5p mature miRNA
• Sequence: 14 - AGCUUCUUUACAGUGCUGCCUUG - 36
• Evidence: experimental ; Illumina [2]

References

1. PubMed ID: 15592404
   Sequence and comparative analysis of the chicken genome provide unique perspectives on vertebrate evolution
   "International Chicken Genome Sequencing Consortium"
   "Nature (2004) 432:695-716


2. 
   "McBride D, Carre W, Law A, Clinton M"
   (None) None:


3. PubMed ID: 23034410
   Birth and expression evolution of mammalian microRNA genes
   "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
   "Genome Res (2013) 23:34-45