miRBase entry: gga-mir-103-2

Stem-loop gga-mir-103-2


Accession
MI0001213
Description
Gallus gallus gga-mir-103-2 precursor miRNA
Gene family
MIPF0000024; mir-103

Literature search
8 open access papers mention gga-mir-103-2
(86 sentences)

Sequence

455624 reads, 6009 reads per million, 5 experiments
ucucugugcuuucAGCUUCUUUACAGUGCUGCCUUGuugcguucaugucaAGCAGCAUUGUACAGGGCUAUGAaagaacagag
.((((((.(((((((((.((.(((((((((((.(((..((......)))))))))))))))).)))))..)))))).))))))

Structure
u      g      --   U  U           C   uu  gu 
 cucugu cuuucA  GCU CU UACAGUGCUGC UUG  gc  u
 |||||| ||||||  ||| || ||||||||||| |||  ||   
 gagaca gaaAGU  CGG GA AUGUUACGACG Aac  ug  c
-      a      AU   -  C           -   --  ua 


Annotation confidence High
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Genome context
chr4: 89095068-89095150 [-]

Database links

Mature gga-miR-103-3p

Accession MIMAT0001145
Description Gallus gallus gga-miR-103-3p mature miRNA
Sequence 51 - AGCAGCAUUGUACAGGGCUAUGA - 73
Evidence experimental
Illumina [2]
Database links
Predicted targets

Mature gga-miR-103-2-5p

Accession MIMAT0026519
Description Gallus gallus gga-miR-103-2-5p mature miRNA
Sequence 14 - AGCUUCUUUACAGUGCUGCCUUG - 36
Evidence experimental
Illumina [2]

References

  1. PubMed ID: 15592404
    Sequence and comparative analysis of the chicken genome provide unique perspectives on vertebrate evolution
    "International Chicken Genome Sequencing Consortium"
    "Nature (2004) 432:695-716


  2. "McBride D, Carre W, Law A, Clinton M"
    (None) None:

  3. PubMed ID: 23034410
    Birth and expression evolution of mammalian microRNA genes
    "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
    "Genome Res (2013) 23:34-45