miRBase entry: gga-mir-103-1

Stem-loop gga-mir-103-1


Accession
MI0001236
Description
Gallus gallus gga-mir-103-1 precursor miRNA
Gene family
MIPF0000024; mir-103

Literature search
8 open access papers mention gga-mir-103-1
(86 sentences)

Sequence

455602 reads, 6009 reads per million, 5 experiments
ugcugccuUCGGCUUCUUUACAGUGCUGCCUUGuugcauauggaucaAGCAGCAUUGUACAGGGCUAUGAaggcacug
...(((((((((((.((.(((((((((((.(((.(.(....).).)))))))))))))).))))))..)))))))...

Structure
ugc       --    U  U           C   u g a 
   ugccuUC  GGCU CU UACAGUGCUGC UUG u c u
   |||||||  |||| || ||||||||||| ||| | |  
   acggaAG  UCGG GA AUGUUACGACG Aac a g a
guc       UA    -  C           -   u g u 


Annotation confidence Not enough data
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Genome context
chr13: 4689830-4689907 [+]

Database links

Mature gga-miR-103-3p

Accession MIMAT0001145
Description Gallus gallus gga-miR-103-3p mature miRNA
Sequence 48 - AGCAGCAUUGUACAGGGCUAUGA - 70
Evidence experimental
Illumina [2]
Database links
Predicted targets

Mature gga-miR-103-1-5p

Accession MIMAT0031070
Description Gallus gallus gga-miR-103-1-5p mature miRNA
Sequence 9 - UCGGCUUCUUUACAGUGCUGCCUUG - 33
Evidence experimental
Illumina [2]

References

  1. PubMed ID: 15592404
    Sequence and comparative analysis of the chicken genome provide unique perspectives on vertebrate evolution
    "International Chicken Genome Sequencing Consortium"
    "Nature (2004) 432:695-716


  2. "McBride D, Carre W, Law A, Clinton M"
    (None) None:

  3. PubMed ID: 23034410
    Birth and expression evolution of mammalian microRNA genes
    "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
    "Genome Res (2013) 23:34-45