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miRBase |
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Stem-loop sequence gga-mir-301a |
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Accession | MI0001240 (change log) | |||||||||
Previous IDs | gga-mir-301 | |||||||||
Description | Gallus gallus miR-301 stem-loop | |||||||||
Gene family | MIPF0000034; mir-130 | |||||||||
Literature search |
4 open access papers mention gga-mir-301a | |||||||||
Stem-loop |
uggcu u cug c --- a gucugc 5' gcugg aucg gcu ugacaaugu ugcacu cu a ||||| |||| ||| ||||||||| |||||| || 3' ugacc uggu cga acuguuaua acguga ga c ----c u uua a aua c aauaaa |
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Deep sequencing |
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Confidence |
Annotation confidence: high
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Genome context |
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Clustered miRNAs |
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Database links |
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Mature sequence gga-miR-301a-5p |
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Accession | MIMAT0026531 |
Sequence |
21 - ucugacaauguugcacuacu - 40 |
Deep sequencing | 49 reads, 4 experiments |
Evidence | experimental; Illumina [3] |
Predicted targets |
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Mature sequence gga-miR-301a-3p |
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Accession | MIMAT0001166 |
Previous IDs | gga-miR-301 |
Sequence |
57 - cagugcaauaauauugucaaagcau - 81 |
Deep sequencing | 7620 reads, 5 experiments |
Evidence | experimental; cloned [2], Illumina [3] |
Predicted targets |
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References |
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1 |
PMID:15592404
"Sequence and comparative analysis of the chicken genome provide unique perspectives on vertebrate evolution"
Nature. 432:695-716(2004).
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2 |
PMID:18256158
"MicroRNA profile of Marek's disease virus-transformed T-cell line MSB-1: predominance of virus-encoded microRNAs"
J Virol. 82:4007-4015(2008).
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3 |
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Unpublished.
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4 |
PMID:18256158
"MicroRNA profile of Marek's disease virus-transformed T-cell line MSB-1: predominance of virus-encoded microRNAs"
J Virol. 82:4007-4015(2008).
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5 |
PMID:23034410
"Birth and expression evolution of mammalian microRNA genes"
Genome Res. 23:34-45(2013).
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