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miRBase |
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Stem-loop sequence gga-mir-200a |
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Accession | MI0001249 (change log) | |||||||
Description | Gallus gallus miR-200a stem-loop | |||||||
Gene family | MIPF0000019; mir-8 | |||||||
Literature search |
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17 open access papers mention gga-mir-200a | |||||||
Stem-loop |
- - g - c uuucuu 5' ggu c cucu ugggcauc uuacuagacagug ugga g ||| | |||| |||||||| ||||||||||||| |||| 3' cca g ggga auuuguag aauggucugucac aucu g a u a c a uaucua |
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Deep sequencing |
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Confidence |
Annotation confidence: high
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Genome context |
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Clustered miRNAs |
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Database links |
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Mature sequence gga-miR-200a-5p |
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Accession | MIMAT0026533 |
Sequence |
14 - caucuuacuagacagugcugga - 35 |
Deep sequencing | 740 reads, 3 experiments |
Evidence | experimental; Illumina [2] |
Predicted targets |
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Mature sequence gga-miR-200a-3p |
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Accession | MIMAT0001171 |
Sequence |
52 - uaacacugucugguaacgaugu - 73 |
Deep sequencing | 84244 reads, 5 experiments |
Evidence | experimental; Illumina [2] |
Database links |
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Predicted targets |
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References |
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1 |
PMID:15592404
"Sequence and comparative analysis of the chicken genome provide unique perspectives on vertebrate evolution"
Nature. 432:695-716(2004).
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2 |
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Unpublished.
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3 |
PMID:23034410
"Birth and expression evolution of mammalian microRNA genes"
Genome Res. 23:34-45(2013).
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