Stem-loop gga-mir-7-1

Accession

MI0001272

Description

Gallus gallus gga-mir-7-1 precursor miRNA

Literature search

11 open access papers mention gga-mir-7-1
(181 sentences)

Sequence

34135 reads, 454 reads per million, 5 experiments

uggauguuggucuaguucugugUGGAAGACUAGUGAUUUUGUUGuuuuuagauaauuaaauugacaacaaaucacagucugccauauggcacagaucaugccucuacag
((((.((((((((.((.((((((((.(((((.(((((((.((((((((((......))))..)))))))))))))))))).)))))))).)))))))).)).))))...

Structure

---    u  -      a  u        A     A       U      --    ga 
   ugga gu uggucu gu cugugUGG AGACU GUGAUUU GUUGuu  uuua  u
   |||| || |||||| || |||||||| ||||| ||||||| ||||||  ||||   
   aucu cg acuaga ca gguauacc ucuga cacuaaa caacag  aaau  a
gac    c  u      -  c        g     -       -      uu    ua 

Annotation confidence Medium

Genome context

chrZ: 40078117-40078225 [-]

Mature gga-miR-7

• Accession: MIMAT0001157
• Description: Gallus gallus gga-miR-7 mature miRNA
• Sequence: 23 - UGGAAGACUAGUGAUUUUGUUG - 44
• Evidence: experimental ; cloned [2]

References

1. PubMed ID: 15592404
   Sequence and comparative analysis of the chicken genome provide unique perspectives on vertebrate evolution
   "International Chicken Genome Sequencing Consortium"
   "Nature (2004) 432:695-716


2. PubMed ID: 18256158
   MicroRNA profile of Marek's disease virus-transformed T-cell line MSB-1: predominance of virus-encoded microRNAs
   "Yao Y, Zhao Y, Xu H, Smith LP, Lawrie CH, Watson M, Nair V"
   "J Virol (2008) 82:4007-4015


3. 
   "McBride D, Carre W, Law A, Clinton M"
   (None) None: