Stem-loop dps-let-7

Accession

MI0001288

Description

Drosophila pseudoobscura dps-let-7 precursor miRNA

Literature search

9 open access papers mention dps-let-7
(41 sentences)

Sequence

2142809 reads, 13113.0 reads per million, 22 experiments

ucuggcaaauUGAGGUAGUAGGUUGUAUAGUaguacuucagaucguaCUAUACAAUGUGCUAGCUUUCUuugcuuga
((.((((((..(((.(((((.(((((((((((.............))))))))))).))))).)))..)))))).))

Structure

  u      uU   G     G           guacu 
uc ggcaaa  GAG UAGUA GUUGUAUAGUa     u
|| ||||||  ||| ||||| |||||||||||     c
ag ucguuU  UUC AUCGU UAACAUAUCau     a
  u      CU   G     G           gcuag 

Annotation confidence High

Genome context

ref|NC_046681.1|: 21485118-21485194 [+]

Clustered miRNAs

2 other miRNAs are < 10 kb from dps-let-7

Mature dps-let-7-5p

• Accession: MIMAT0001198
• Description: Drosophila pseudoobscura dps-let-7-5p mature miRNA
• Sequence: 11 - UGAGGUAGUAGGUUGUAUAGU - 31
• Evidence: not_experimental

Mature dps-let-7-3p

• Accession: MIMAT0053357
• Description: Drosophila pseudoobscura dps-let-7-3p mature miRNA
• Sequence: 48 - CUAUACAAUGUGCUAGCUUUCU - 69
• Evidence: not_experimental

References