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miRBase |
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Stem-loop sequence dre-mir-221 |
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Accession | MI0001387 (change log) | |||||
Description | Danio rerio miR-221 stem-loop | |||||
Gene family | MIPF0000051; mir-221 | |||||
Literature search |
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10 open access papers mention dre-mir-221 | |||||
Stem-loop |
------------------- gu ug u auuu u 5' guc gaacc gca acaauguag cugug ggua ||| ||||| ||| ||||||||| ||||| ||| c 3' cgg uuugg cgu uguuacauc gacau cuau cucgucuuaauaagacgac ac gu c ---- - |
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Deep sequencing |
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Confidence |
Annotation confidence: high
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Genome context |
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Clustered miRNAs |
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Database links |
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Mature sequence dre-miR-221-5p |
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Accession | MIMAT0031926 |
Sequence |
8 - accuggcauacaauguagauuucugu - 33 |
Deep sequencing | 7963 reads, 11 experiments |
Evidence | not experimental |
Database links |
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Mature sequence dre-miR-221-3p |
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Accession | MIMAT0001288 |
Previous IDs | dre-miR-221 |
Sequence |
48 - agcuacauugucugcuggguuuc - 70 |
Deep sequencing | 36306 reads, 11 experiments |
Evidence | experimental; cloned [1-2] |
Database links |
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Predicted targets |
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References |
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1 |
PMID:12624257
"Vertebrate microRNA genes"
Science. 299:1540(2003).
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2 |
PMID:15937218
"The developmental miRNA profiles of zebrafish as determined by small RNA cloning"
Genes Dev. 19:1288-1293(2005).
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