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miRBase |
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Stem-loop sequence dre-mir-222a |
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Accession | MI0001388 (change log) | |||||
Previous IDs | dre-mir-222 | |||||
Description | Danio rerio miR-222 stem-loop | |||||
Gene family | MIPF0000051; mir-221 | |||||
Literature search |
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8 open access papers mention dre-mir-222a | |||||
Stem-loop |
gccgguggcuu -uc u g u - auc ugu 5' gu gggugc cau aga gcucaguagucag uguag cug c || |||||| ||| ||| ||||||||||||| ||||| ||| a 3' cg uuuacg gua ucu ugggucaucgguc acauc gac c ----------u ucu - g c u gac uaa |
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Deep sequencing |
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Confidence |
Annotation confidence: high
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Genome context |
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Clustered miRNAs |
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Database links |
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Mature sequence dre-miR-222a-5p |
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Accession | MIMAT0031927 |
Sequence |
30 - ugcucaguagucaguguagaucc - 52 |
Deep sequencing | 36107 reads, 11 experiments |
Evidence | not experimental |
Database links |
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Mature sequence dre-miR-222a-3p |
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Accession | MIMAT0001289 |
Previous IDs | dre-miR-222a |
Sequence |
68 - agcuacaucuggcuacugggucuc - 91 |
Deep sequencing | 53940 reads, 11 experiments |
Evidence | experimental; cloned [1-2] |
Database links |
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Predicted targets |
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References |
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1 |
PMID:12624257
"Vertebrate microRNA genes"
Science. 299:1540(2003).
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2 |
PMID:15937218
"The developmental miRNA profiles of zebrafish as determined by small RNA cloning"
Genes Dev. 19:1288-1293(2005).
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