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miRBase |
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Stem-loop sequence ath-MIR426 |
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Accession | MI0001441 (change log) | ||||
Description | Arabidopsis thaliana miR426 stem-loop | ||||
Literature search |
1 open access papers mention ath-MIR426 | ||||
Stem-loop |
-gaggggggaca -ggaa u a guaguacuagaauacuugu 5' auuuuu au uguccuu cgg c |||||| || ||||||| ||| 3' uaaaaa ua acaggaa gcc c cucaaauuaaaa aggag u - aauaaaguuuagcaguaca |
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Confidence |
Annotation confidence: not enough data
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Comments |
miR426 was predicted and validated using procedures described in [1], but the sequence itself was not reported (Takashi Soyano, pers. comm.). The status of this sequence as a miRNA has been questioned on the basis of lack of conservation in genomes other than Arabidopsis and rice, moderately poor precursor hairpin structure, lack of identified targets, and low Northern blot signal [2]. This sequence may therefore be removed in subsequent data releases. |
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Genome context |
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Database links |
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Mature sequence ath-miR426 |
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Accession | MIMAT0001337 |
Sequence |
14 - uuuuggaaauuuguccuuacg - 34 |
Evidence | experimental; Northern [1] |
References |
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1 |
PMID:15345049
"Prediction and identification of Arabidopsis thaliana microRNAs and their mRNA targets"
Genome Biol. 5:R65(2004).
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2 |
PMID:16669754
"MicroRNAS and their regulatory roles in plants"
Annu Rev Plant Biol. 57:19-53(2006).
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