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miRBase |
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Stem-loop sequence zma-MIR164c |
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Accession | MI0001472 (change log) | ||||
Description | Zea mays miR164c stem-loop | ||||
Gene family | MIPF0000045; MIR164 | ||||
Literature search |
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29 open access papers mention zma-MIR164c | ||||
Stem-loop |
u c g c u uu c - u agcggccggcggcccggcucucgcagucacgcguacgucgccugagcggcgcgcgcgagagagagagaca 5' ggcgaggug gc cgguggagaag agggcacgugcau c uc gucg ccggccggcu ggc c ||||||||| || ||||||||||| ||||||||||||| | || |||| |||||||||| ||| g 3' ccgcuccgc cg gcuaccucuuc ucccguguacgug g ag uagc ggccggccgg ccg g u a g u c -u c c - accgaccgaccgacccaaagucuucgaucgacgacguggacguggucaaucggcgcggccgcugcuggac |
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Deep sequencing |
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Confidence |
Annotation confidence: low
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Genome context |
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Database links |
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Mature sequence zma-miR164c-5p |
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Accession | MIMAT0001367 |
Previous IDs | zma-miR164c |
Sequence |
18 - uggagaagcagggcacgugca - 38 |
Deep sequencing | 4192 reads, 174 experiments |
Evidence | experimental; Illumina [2] |
Database links |
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Mature sequence zma-miR164c-3p |
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Accession | MIMAT0015139 |
Previous IDs | zma-miR164c* |
Sequence |
235 - caugugcccuucuucuccauc - 255 |
Deep sequencing | 314 reads, 105 experiments |
Evidence | experimental; Illumina [2] |
References |
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1 |
"Identifying microRNAs in plant genomes"
Proc IEEE CSB :718-723(2004).
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2 |
PMID:19936050
"A genome-wide characterization of microRNA genes in maize"
PLoS Genet. 5:e1000716(2009).
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