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miRBase |
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Stem-loop sequence zma-MIR167c |
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Accession | MI0001478 (change log) | ||||
Description | Zea mays miR167c stem-loop | ||||
Gene family | MIPF0000023; MIR167_1 | ||||
Literature search |
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29 open access papers mention zma-MIR167c | ||||
Stem-loop |
u ---- c a -- uc a -g gaga 5' gcccaa gggaa gaguga gcugcca gcaugaucuagc gg gugaucac cgag a |||||| ||||| |||||| ||||||| |||||||||||| || |||||||| |||| c 3' cggguu cccuu uucacu cgacggu cguacuagaucg cc uacuggug gcuc a a ccug c c gu uu g ga gaua |
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Deep sequencing |
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Confidence |
Annotation confidence: high
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Genome context |
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Database links |
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Mature sequence zma-miR167c-5p |
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Accession | MIMAT0001373 |
Previous IDs | zma-miR167c |
Sequence |
17 - ugaagcugccagcaugaucua - 37 |
Deep sequencing | 24804 reads, 164 experiments |
Evidence | experimental; Illumina [2] |
Database links |
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Mature sequence zma-miR167c-3p |
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Accession | MIMAT0015145 |
Previous IDs | zma-miR167c* |
Sequence |
92 - gaucaugcuguggcagccucacu - 114 |
Deep sequencing | 276 reads, 109 experiments |
Evidence | experimental; Illumina [2] |
Database links |
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References |
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1 |
"Identifying microRNAs in plant genomes"
Proc IEEE CSB :718-723(2004).
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2 |
PMID:19936050
"A genome-wide characterization of microRNA genes in maize"
PLoS Genet. 5:e1000716(2009).
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