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miRBase |
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Stem-loop sequence zma-MIR166b |
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Accession | MI0001488 (change log) | ||||||||
Description | Zea mays miR166b stem-loop | ||||||||
Gene family | MIPF0000004; MIR166 | ||||||||
Literature search |
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33 open access papers mention zma-MIR166b | ||||||||
Stem-loop |
gu uu a cuwucc ----------ug uc c 5' ggaaug gucugguuc aggucuug gauuugagga a caug u |||||| ||||||||| |||||||| |||||||||| | |||| 3' ccuuac cggaccagg ucuagaac cuagacuccu u guac u cc uu c ----au uguuuuuuuuga gu g |
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Deep sequencing |
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Confidence |
Annotation confidence: high
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Genome context |
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Database links |
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Mature sequence zma-miR166b-5p |
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Accession | MIMAT0015151 |
Previous IDs | zma-miR166b* |
Sequence |
3 - ggaauguugucugguucaagg - 23 |
Deep sequencing | 292 reads, 17 experiments |
Evidence | experimental; Illumina [3] |
Database links |
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Mature sequence zma-miR166b-3p |
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Accession | MIMAT0001382 |
Previous IDs | zma-miR166b |
Sequence |
96 - ucggaccaggcuucauuccc - 115 |
Deep sequencing | 154746 reads, 60 experiments |
Evidence | experimental; Illumina [3] |
Database links |
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References |
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1 |
PMID:14999285
"microRNA-mediated repression of rolled leaf1 specifies maize leaf polarity"
Nature. 428:84-88(2004).
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2 |
"Identifying microRNAs in plant genomes"
Proc IEEE CSB :718-723(2004).
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3 |
PMID:19936050
"A genome-wide characterization of microRNA genes in maize"
PLoS Genet. 5:e1000716(2009).
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