Stem-loop sbi-MIR399a

Accession

MI0001541

Description

Sorghum bicolor sbi-MIR399a precursor miRNA

Gene family

MIPF0000015; MIR399

Literature search

3 open access papers mention sbi-MIR399a
(7 sentences)

Sequence

ugccggcgccggcgaauuacggggcaguucgucuuuggcacaaaggcacguccagaacuacucgaugagggucacuugagcugaacugaacaugcgUGCCAAAGGAGAAUUGCCCUGcgauucgcccgugcagaag
.....((((.((((((((.(((((((((((.((((((((((....(((.((.(((..(..((((((((...))).)))))..)..))).)).))))))))))))).))))))))))).)))))))).)))).....

Structure

ugccg    c        a           g          aaag   c  c   aa ua     -   g 
     gcgc ggcgaauu cggggcaguuc ucuuuggcac    gca gu cag  c  cucga uga  
     |||| |||||||| ||||||||||| ||||||||||    ||| || |||  |  ||||| ||| g
     cgug ccgcuuag GUCCCGUUAAG GGAAACCGUg    cgu ca guc  g  gaguu acu  
gaaga    c        c           A          ----   a  a   aa uc     c   g 

Annotation confidence Not enough data

Genome context

chr3: 61878757-61878892 [+]

Mature sbi-miR399a

• Accession: MIMAT0001437
• Description: Sorghum bicolor sbi-miR399a mature miRNA
• Sequence: 97 - UGCCAAAGGAGAAUUGCCCUG - 117
• Evidence: not_experimental

References

1. Conservation and divergence of microRNA families in plants
   "Dezulian T, Palatnik JF, Huson DH, Weigel D"
   Genome Biol. (2005) 6:P13