Stem-loop aga-let-7

Accession

MI0001600

Description

Anopheles gambiae aga-let-7 precursor miRNA

Literature search

13 open access papers mention aga-let-7
(31 sentences)

Sequence

134865 reads, 6615.0 reads per million, 24 experiments

gccuacucccguguUGAGGUAGUUGGUUGUAUAGUaccgugguuccaauacucgaCUAUACAAUCCGCUAACUUACCucguggguagagu
..((((((.((.(.((((.((((.(((((((((((..((.(((......)))))))))))))))).)))).)))).).)).))))))...

Structure

-gc      c  u u    G    U           ac  u   uc 
   cuacuc cg g UGAG UAGU GGUUGUAUAGU  cg ggu  c
   |||||| || | |||| |||| |||||||||||  || |||   
   gauggg gc C AUUC AUCG CUAACAUAUCa  gc uca  a
uga      u  u C    A    C           --  -   ua 

Annotation confidence High

Genome context

ref|NC_064602.1|: 10196543-10196632 [-]

Clustered miRNAs

2 other miRNAs are < 10 kb from aga-let-7

Mature aga-let-7-5p

• Accession: MIMAT0001495
• Description: Anopheles gambiae aga-let-7-5p mature miRNA
• Sequence: 15 - UGAGGUAGUUGGUUGUAUAGU - 35
• Evidence: experimental ; cloned [1]

Mature aga-let-7-3p

• Accession: MIMAT0052990
• Description: Anopheles gambiae aga-let-7-3p mature miRNA
• Sequence: 56 - CUAUACAAUCCGCUAACUUACC - 77
• Evidence: experimental ; cloned [1]

References

1. PubMed ID: 17933784
   Anopheles gambiae miRNAs as actors of defence reaction against Plasmodium invasion
   "Winter F, Edaye S, Huttenhofer A, Brunel C"
   "Nucleic Acids Res (2007) 35:6953-6962