Stem-loop aga-mir-281

Accession

MI0001618

Description

Anopheles gambiae aga-mir-281 precursor miRNA

Literature search

6 open access papers mention aga-mir-281
(15 sentences)

Sequence

7392388 reads, 221481.0 reads per million, 24 experiments

gcaaucgaauaugaaaauaAAGAGAGCUAUCCGUCGACAGUagggauauaauucacUGUCAUGGAAUUGCUCUCUUUAUguacaauucgauauucaacgugc
...(((((((.((...(((((((((((..(((((.((((((.((........)))))))))))))...)))))))))))...)))))))))...........

Structure

--------gca       a  aaa           -UA     C      a  gau 
           aucgaau ug   auaAAGAGAGC   UCCGU GACAGU gg   a
           ||||||| ||   |||||||||||   ||||| |||||| ||    
           uagcuua ac   UAUUUCUCUCG   AGGUA CUGUca cu   u
cgugcaacuua       -  aug           UUA     -      -  uaa 

Annotation confidence High

Genome context

ref|NC_064601.1|: 86247555-86247656 [-]

Mature aga-miR-281-5p

• Accession: MIMAT0053007
• Description: Anopheles gambiae aga-miR-281-5p mature miRNA
• Sequence: 20 - AAGAGAGCUAUCCGUCGACAGU - 41
• Evidence: experimental ; cloned [1]

Mature aga-miR-281-3p

• Accession: MIMAT0001513
• Description: Anopheles gambiae aga-miR-281-3p mature miRNA
• Sequence: 57 - UGUCAUGGAAUUGCUCUCUUUAU - 79
• Evidence: experimental ; cloned [1]

References

1. PubMed ID: 17933784
   Anopheles gambiae miRNAs as actors of defence reaction against Plasmodium invasion
   "Winter F, Edaye S, Huttenhofer A, Brunel C"
   "Nucleic Acids Res (2007) 35:6953-6962