Stem-loop sequence aga-mir-2-2

Accession

MI0001622 (change log)

Previous IDs

aga-mir-2c

Description

Anopheles gambiae miR-2-2 stem-loop

Gene family

MIPF0000049; mir-2

Literature search

2 open access papers mention aga-mir-2-2
(14 sentences)

Stem-loop

   uau      --cc        -        c        u     uu   u 
5'    ugggug    augcauug ucaucaaa uugguugu guagc  gcu u
      ||||||    |||||||| |||||||| |||||||| |||||  ||| g
3'    auccau    ugcguaac aguaguuu gaccgaca uaucg  uga a
   ---      ucac        g        c        c     -u   u 

Confidence

Annotation confidence: not enough data

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Genome context

• Coordinates (AgamP3; GCA_000005575.1): chr2L: 37758699-37758796 [-]
• Overlapping transcripts:

  intergenic

Clustered miRNAs

< 10kb from aga-mir-2-2

• aga-mir-2-2: chr2L: 37758699-37758796 [-]
• aga-mir-2c: chr2L: 37758085-37758193 [-]
• aga-mir-13b: chr2L: 37757564-37757657 [-]
• aga-mir-2b: chr2L: 37757412-37757490 [-]
• aga-mir-2-1: chr2L: 37757103-37757189 [-]

Database links

• miRBase Tracker:MI0001622

Mature sequence aga-miR-2

• Accession: MIMAT0009202
• Sequence: 59 - uaucacagccagcuuugaugagc - 81
• Evidence: by similarity; MI0000431

References

1. " Griffiths-Jones S Unpublished (2009).