Stem-loop mtr-MIR169a

Accession

MI0001741

Description

Medicago truncatula mtr-MIR169a precursor miRNA

Literature search

12 open access papers mention mtr-MIR169a
(54 sentences)

Sequence

aagaggcagagagaguaaugCAGCCAAGGAUGACUUGCCGAcaacauuggcgaauguucaugugauuucugccucauugugccggcaaguuguccuuggcuauguuagucucucaucuucu
.(((((..((((((.(((((.(((((((((((((((((((.((.((..((((((...((....)).))).)))....)))).))))))))))))))))))).))))).))))))..)))))

Structure

a     ca      g     C                   A  a  --uu   -   ugu  a 
 agagg  gagaga uaaug AGCCAAGGAUGACUUGCCG ca ca    ggc gaa   uc u
 |||||  |||||| ||||| ||||||||||||||||||| || ||    ||| |||   ||  
 ucuuc  cucucu auugu ucgguuccuguugaacggc gu gu    ccg cuu   ag g
-     ua      g     a                   c  -  uacu   u   --u  u 

Annotation confidence Not enough data

Genome context

contig_79842: 860-980 [+]

Mature mtr-miR169a

• Accession: MIMAT0001643
• Description: Medicago truncatula mtr-miR169a mature miRNA
• Sequence: 21 - CAGCCAAGGAUGACUUGCCGA - 41
• Evidence: not_experimental

References

1. Conservation and divergence of microRNA families in plants
   "Dezulian T, Palatnik JF, Huson DH, Weigel D"
   Genome Biol. (2005) 6:P13


2. PubMed ID: 19555436
   Cloning and characterization of small RNAs from Medicago truncatula reveals four novel legume-specific microRNA families
   "Jagadeeswaran G, Zheng Y, Li YF, Shukla LI, Matts J, Hoyt P, Macmil SL, Wiley GB, Roe BA, Zhang W, Sunkar R"
   "New Phytol (2009) 184:85-98