Stem-loop mtr-MIR399c

Accession

MI0001748

Description

Medicago truncatula mtr-MIR399c precursor miRNA

Gene family

MIPF0000015; MIR399

Literature search

9 open access papers mention mtr-MIR399c
(22 sentences)

Sequence

guucugcuguugaggaaugauagggaaaaucucuuuuggcagagaggaguaaaaaucuuaaacaggaauguuucugguuUGCCAAAGGAGAUUUGCCCUGccauuuuugacagcuauug
.....((((((.(((((((.(((((.(((((((((((((((((..((((......((((....))))....))))..))))))))))))))))).))))).))))))))))))).....

Structure

guucu      g       a     a                 ga    uaaaaa    a 
     gcuguu aggaaug uaggg aaaucucuuuuggcaga  ggag      ucuu a
     |||||| ||||||| ||||| |||||||||||||||||  ||||      ||||  
     cgacag uuuuuac GUCCC UUUAGAGGAAACCGUuu  ucuu      agga a
guuau      -       c     G                 gg    --ugua    c 

Annotation confidence Not enough data

Genome context

chr8: 24010865-24010983 [-]

Clustered miRNAs

4 other miRNAs are < 10 kb from mtr-MIR399c

Mature mtr-miR399c

• Accession: MIMAT0001650
• Description: Medicago truncatula mtr-miR399c mature miRNA
• Sequence: 80 - UGCCAAAGGAGAUUUGCCCUG - 100
• Evidence: not_experimental

References

1. Conservation and divergence of microRNA families in plants
   "Dezulian T, Palatnik JF, Huson DH, Weigel D"
   Genome Biol. (2005) 6:P13