Stem-loop sequence sof-MIR396

Accession

MI0001755 (change log)

Description

Saccharum officinarum miR396 stem-loop

Gene family

MIPF0000047; MIR396

Literature search

7 open access papers mention sof-MIR396
(26 sentences)

Stem-loop

   aga      -       ga c            c             -  -aa -   -  c  c    a 
5'    uggccu ucuuugu  u uuccacagcuuu uugaacugcaucu cu   g agg ag ag ucga g
      |||||| |||||||  | |||||||||||| ||||||||||||| ||   | ||| || || ||||  
3'    accgga agagacg  a agggugucgaaa aacuugacgugga ga   c ucc uc uc agcu c
   --a      g       uc a            u             c  gua g   a  -  a    c 

Confidence

Annotation confidence: not enough data

Feedback: Do you believe this miRNA is real?

Database links

• miRBase Tracker:MI0001755

Mature sequence sof-miR396

• Accession: MIMAT0001657
• Sequence: 21 - uuccacagcuuucuugaacug - 41
• Evidence: by similarity; MI0001046

References

1. PMID:15916721 "Identification and characterization of new plant microRNAs using EST analysis" Zhang BH, Pan XP, Wang QL, Cobb GP, Anderson TA Cell Res. 15:336-360(2005).
2. "Conservation and divergence of microRNA families in plants" Dezulian T, Palatnik JF, Huson DH, Weigel D http://genomebiology.com/2005/6/11/p13 (2005).