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miRBase |
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Stem-loop sequence zma-MIR408a |
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Accession | MI0001846 (change log) | ||||
Previous IDs | zma-MIR408 | ||||
Description | Zea mays miR408 stem-loop | ||||
Gene family | MIPF0000102; MIR408 | ||||
Literature search |
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21 open access papers mention zma-MIR408a | ||||
Stem-loop |
-------- uugguuuu u a u a a u u cau aaguggagggacuagcuugcgaggcagaaagaaggu 5' gggg gauu ggag caggga gag cag gca ggga ggggc caaca g |||| |||| |||| |||||| ||| ||| ||| |||| ||||| ||||| c 3' cccc cuag ccuc gucccu cuc guc cgu cccu ccucg guugu c cguugcca -------- - g u c a c c -uu gaggguaguagcaaaguggccccuccguggccguga |
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Deep sequencing |
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Confidence |
Annotation confidence: not enough data
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Genome context |
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Database links |
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Mature sequence zma-miR408a |
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Accession | MIMAT0001748 |
Previous IDs | zma-miR408 |
Sequence |
152 - cugcacugccucuucccuggc - 172 |
Deep sequencing | 817 reads, 164 experiments |
Evidence | by similarity; MI0001149 |
Database links |
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References |
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1 |
PMID:15916721
"Identification and characterization of new plant microRNAs using EST analysis"
Cell Res. 15:336-360(2005).
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2 |
"Conservation and divergence of microRNA families in plants"
http://genomebiology.com/2005/6/11/p13 (2005).
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