Stem-loop dre-mir-24-3

Accession

MI0001920

Description

Danio rerio dre-mir-24-3 precursor miRNA

Gene family

MIPF0000041; mir-24

Literature search

5 open access papers mention dre-mir-24-3
(81 sentences)

Sequence

12635 reads, 706 reads per million, 11 experiments

gcugaacgggagucauaugagagauagauggagcuggccucccgugccuacugagcugauuacaguacugugcaaacacUGGCUCAGUUCAGCAGGAACAGgagucugguccacaaacuccaccaaacacugcugcuucagc
(((((((((.(((....((.(((...(.((((.((((.((((.((.(((.(((((((((...((((...((....))))))..))))))))).))).)).)))).)))))))))...)))))......))).))).))))))

Structure

      -   g   --caua  a   aua a    g    c    c  g   a         uua    acu  g 
gcugaa cgg agu      ug gag   g ugga cugg cucc gu ccu cugagcuga   cagu   gu c
|||||| ||| |||      || |||   | |||| |||| |||| || ||| |||||||||   ||||   ||  
cgacuu guc uca      ac cuc   c accu gguc gagG CA GGA GACUUGACU   GUca   ca a
      c   g   caaacc  -   aaa -    -    u    A  A   C         -CG    ---  a 

Annotation confidence High

Genome context

chr8: 30162492-30162633 [-]

Clustered miRNAs

2 other miRNAs are < 10 kb from dre-mir-24-3

Mature dre-miR-24

• Accession: MIMAT0001792
• Description: Danio rerio dre-miR-24 mature miRNA
• Sequence: 80 - UGGCUCAGUUCAGCAGGAACAG - 101
• Evidence: experimental ; cloned [1]

References

1. PubMed ID: 15937218
   The developmental miRNA profiles of zebrafish as determined by small RNA cloning
   "Chen PY, Manninga H, Slanchev K, Chien M, Russo JJ, Ju J, Sheridan R, John B, Marks DS, Gaidatzis D, Sander C, Zavolan M, Tuschl T"
   "Genes Dev (2005) 19:1288-1293