Search results

mir-24 family in Rfam (RF00178)

Summary
This family represents the microRNA (miRNA) mir-24 family. miRNAs are transcribed as ~70nt precursors (modelled here) and subsequently processed by the Dicer enzyme to give a ~22nt product. In this case the mature sequence comes from the 3' arm of the precursor. The extents of the hairpin precursors are not generally known and are estimated based on hairpin prediction. The products are thought to have regulatory roles through complementarity to mRNA. The involvement of Dicer in miRNA processing suggests a relationship with the phenomenon of RNA interference. miRNAs are numbered based on the sequence of the mature RNA. miR-24 has been identified in human and mouse [1]. Family represents the microRNA (miRNA) precursor mir-24 imported from miRBase [3].
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5'

There are 63 hairpins in the mir-24 family

Name Accession RPM Chromosome Start End Strand Confidence
hsa-mir-24-1 MI0000080 2988 chr9 95086021 95086088 + High
hsa-mir-24-2 MI0000081 3119 chr19 13836287 13836359 - High
mmu-mir-24-1 MI0000231 10807 chr13 63301208 63301275 + High
mmu-mir-24-2 MI0000572 10986 chr8 84208815 84208921 + High
rno-mir-24-1 MI0000854 268 chr17 823968 824035 + High
rno-mir-24-2 MI0000855 382 chr19 25318863 25318970 + High
gga-mir-24 MI0001275 1785 chrZ 41649935 41650002 + High
dre-mir-24-4 MI0001918 691 chr22 5307485 5307574 + -
dre-mir-24-2 MI0001919 681 chr3 13412979 13413060 + High
dre-mir-24-3 MI0001920 706 chr8 30162492 30162633 - High
dre-mir-24-1 MI0001921 677 chr10 15960835 15960914 + High
ssc-mir-24-1 MI0002428 1148 chr2 65582174 65582245 + High
mml-mir-24-1 MI0002637 3588 chr15 108904876 108904943 + High
ppy-mir-24-1 MI0002638 - chr9 91049387 91049454 + -
mne-mir-24-1 MI0002639 - None None -
ppa-mir-24-1 MI0002640 - chr9 94314373 94314440 + -
ggo-mir-24 MI0003037 - chr19 13613998 13614070 - -
ppa-mir-24-2 MI0003042 - chr19 14130330 14130402 - -
ppy-mir-24-2 MI0003047 - NW_002966782.1 22997 23069 - -
ptr-mir-24-2 MI0003050 - chr19 14579133 14579205 - -
mml-mir-24-2 MI0003053 3597 chr19 13838860 13838932 - -
mne-mir-24-2 MI0003058 - None None -
fru-mir-24-1 MI0003413 - HE602554.1 7365203 7365281 + -
tni-mir-24-1 MI0003414 - 12 8518114 8518183 + -
fru-mir-24-2 MI0003433 - HE602539.1 5649720 5649801 + -
tni-mir-24-2 MI0003434 - 3 8971059 8971138 + -
xtr-mir-24a MI0004895 - chr1 123464315 123464381 + -
xtr-mir-24b MI0004896 - chr3 129999414 129999481 + -
bta-mir-24-2 MI0005053 562 chr7 13045858 13045929 - High
mdo-mir-24-2 MI0005365 1320 chr3 446526144 446526216 + -
mdo-mir-24-1 MI0005368 16 chr6 17696508 17696564 + -
oan-mir-24-1 MI0006757 2342 Contig22293 5770 5853 - High
cfa-mir-24-1 MI0008010 - chr1 71677608 71677669 - -
cfa-mir-24-2 MI0008041 - chr20 48620684 48620745 + -
ptr-mir-24-1 MI0008588 - chr9 72784548 72784614 + -
bta-mir-24-1 MI0009761 551 chr8 83484370 83484437 + High
eca-mir-24-1 MI0012738 309 chr7 44930163 44930230 + -
eca-mir-24-2 MI0012864 293 chr23 2317177 2317244 - -
ssc-mir-24-2 MI0013111 451 chr10 31340334 31340413 - -
tgu-mir-24 MI0013753 - chrZ 9899801 9899932 - -
pma-mir-24 MI0017028 - GL477342.1 31004 31097 + -
aca-mir-24-1 MI0018833 - chr2 29157637 29157729 - -
aca-mir-24-2 MI0018834 - chr2 40591310 40591402 - -
ola-mir-24a-1 MI0019426 - 4 34612920 34613020 + -
ola-mir-24a-2 MI0019460 - 8 13687323 13687411 - -
ola-mir-24a-3 MI0019467 - 9 8309654 8309755 - -
ola-mir-24b MI0019526 - 17 29776748 29776854 - -
sha-mir-24-2 MI0019613 - GL841415.1 821238 821387 + -
sha-mir-24-1 MI0019616 - GL841474.1 1160603 1160752 + -
ccr-mir-24 MI0023380 - None None -
oan-mir-24-2 MI0024074 2324 Contig6812 3735 3794 + High
ipu-mir-24-2 MI0024596 - None None -
ipu-mir-24-1 MI0024597 - None None -
ipu-mir-24-3 MI0024598 - None None -
ipu-mir-24b MI0024670 - None None -
ssa-mir-24a-4 MI0026641 - None None -
ssa-mir-24a-2 MI0026642 - None None -
ssa-mir-24a-3 MI0026643 - None None -
ssa-mir-24a-1 MI0026644 - None None -
ssa-mir-24b MI0026645 - None None -
chi-mir-24 MI0030713 - chr8 82819368 82819447 + -
oha-mir-24-1 MI0031432 - AZIM01002605.1 296607 296683 - -
oha-mir-24-2 MI0031433 - AZIM01000021.1 587002 587078 - -



Comments or questions? Email mirbase@manchester.ac.uk