Stem-loop ssa-mir-24a-1

Accession

MI0026644

Description

Salmo salar ssa-mir-24a-1 precursor miRNA

Literature search

1 open access papers mention ssa-mir-24a-1
(1 sentences)

Sequence

UGCCUACUGAACUGGUAUCAGUgugaacucugaguacUGGCUCAGUUCAGCAGGAAC
..(((.(((((((((..(((((((........).)))))).))))))))).)))...

Structure

-UG   A         UA      - gaa 
   CCU CUGAACUGG  UCAGUg u   c
   ||| |||||||||  |||||| |    
   GGA GACUUGACU  GGUcau a   u
CAA   C         -C      g guc 

Annotation confidence Not enough data

Genome context

Unknown

Mature ssa-miR-24a-3p

• Accession: MIMAT0032555
• Description: Salmo salar ssa-miR-24a-3p mature miRNA
• Sequence: 38 - UGGCUCAGUUCAGCAGGAAC - 57
• Evidence: experimental ; Illumina [1]

Mature ssa-miR-24a-5p

• Accession: MIMAT0032556
• Description: Salmo salar ssa-miR-24a-5p mature miRNA
• Sequence: 1 - UGCCUACUGAACUGGUAUCAGU - 22
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23865519
   Discovery and characterization of miRNA genes in Atlantic salmon (Salmo salar) by use of a deep sequencing approach
   Andreassen R, Worren MM, Høyheim B
   BMC Genomics (2013) 14:482