Stem-loop pma-mir-24

Accession

MI0017028

Description

Petromyzon marinus pma-mir-24 precursor miRNA

Sequence

aucugggccggaucuucugugccuacuguucugacaucagucgucuauaaaaagcacUGGCUCAGUUCAGCAGGAACAGaagucucguccauug
...(((((.(((.(((((((.(((.(((..((((..(((((.(.((......)))))))).))))..))).))).)))))))))).)))))...

Structure

auc     c   u       g   a   uu    ca     c u  au 
   ugggc gga cuucugu ccu cug  cuga  ucagu g cu  a
   ||||| ||| ||||||| ||| |||  ||||  ||||| | ||   
   accug ucu gaaGACA GGA GAC  GACU  GGUca c ga  a
guu     c   -       A   C   UU    -C     - -  aa 

Annotation confidence Not enough data

Genome context

GL477342.1: 31004-31097 [+]

Clustered miRNAs

2 other miRNAs are < 10 kb from pma-mir-24

Mature pma-miR-24

• Accession: MIMAT0019405
• Description: Petromyzon marinus pma-miR-24 mature miRNA
• Sequence: 58 - UGGCUCAGUUCAGCAGGAACAG - 79
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 20959416
   microRNAs reveal the interrelationships of hagfish, lampreys, and gnathostomes and the nature of the ancestral vertebrate
   "Heimberg AM, Cowper-Sal-lari R, Semon M, Donoghue PC, Peterson KJ"
   "Proc Natl Acad Sci U S A (2010) 107:19379-19383