Accession
MI0003434
Description
Tetraodon nigroviridis
tni-mir-24-2 precursor miRNA
Sequence
21369
reads,
781.0
reads per million, 3 experiments
gggucagucuccugUGCCUGCUGUGCUGAUAAUCAGUgugugacguuggcUGGCUCAGUUCAGCAGGAACAGgggacugg
....(((((((((((.(((((((.(((((...(((((...........))))).))))).))))))).))))))))))).
....(((((((((((.(((((((.(((((...(((((...........))))).))))).))))))).))))))))))).
Structure
gggu G U UAA gugu
cagucuccugU CCUGCUG GCUGA UCAGU g
||||||||||| ||||||| ||||| ||||| a
gucagggGACA GGACGAC UGACU GGUcg c
---g A U --C guug
Annotation confidence
High
Do you think this miRNA is real?
Comments
This Tetraodon miRNA sequence is predicted based on homology with a verified zebrafish sequence (Mihaela Zavolan, personal communication).
Genome context
3: 8971059-8971138 [+]
Clustered miRNAs
2 other miRNAs are < 10 kb from tni-mir-24-2
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature tni-miR-24-2-5p
| Accession | MIMAT0052977 |
| Description | Tetraodon nigroviridis tni-miR-24-2-5p mature miRNA |
| Sequence | 15 - UGCCUGCUGUGCUGAUAAUCAGU - 37 |
| Evidence | not_experimental |
Mature tni-miR-24-3p
| Accession | MIMAT0003066 |
| Description | Tetraodon nigroviridis tni-miR-24-3p mature miRNA |
| Sequence | 51 - UGGCUCAGUUCAGCAGGAACAG - 72 |
| Evidence | not_experimental |
References
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