Stem-loop ccr-mir-24

Accession

MI0023380

Description

Cyprinus carpio ccr-mir-24 precursor miRNA

Literature search

1 open access papers mention ccr-mir-24
(2 sentences)

Sequence

70246 reads, 590.0 reads per million, 33 experiments

cuggucuccugUGCCUGCUGUGCUGAUAAUCAGUggauggcuguagcUGGCUCAGUUCAGCAGGAACAGgggucu
..((.(((((((.(((((((.(((((...(((((...........))))).))))).))))))).))))))).))

Structure

cu  u       G       U     UAA     ggau 
  gg cuccugU CCUGCUG GCUGA   UCAGU    g
  || ||||||| ||||||| |||||   |||||    g
  uc gggGACA GGACGAC UGACU   GGUcg    c
--  u       A       U     --C     augu 

Annotation confidence High

Genome context

Unknown

Mature ccr-miR-24-5p

• Accession: MIMAT0058319
• Description: Cyprinus carpio ccr-miR-24-5p mature miRNA
• Sequence: 12 - UGCCUGCUGUGCUGAUAAUCAGU - 34
• Evidence: experimental ; Illumina [1]

Mature ccr-miR-24-3p

• Accession: MIMAT0026279
• Description: Cyprinus carpio ccr-miR-24-3p mature miRNA
• Sequence: 48 - UGGCUCAGUUCAGCAGGAACAG - 69
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22303472
   Identification and profiling of microRNAs from skeletal muscle of the common carp
   Yan X, Ding L, Li Y, Zhang X, Liang Y, Sun X, Teng CB
   PLoS One (2012) 7:e30925