Stem-loop ssa-mir-24a-4

Accession

MI0026641

Description

Salmo salar ssa-mir-24a-4 precursor miRNA

Literature search

1 open access papers mention ssa-mir-24a-4
(1 sentences)

Sequence

231619 reads, 1954.0 reads per million, 87 experiments

UGCCUGCUGUGCUGAUAAUCAGugugugagguuagcUGGCUCAGUUCAGCAGGAAC
..(((((((.(((((...(((((...........))))).))))).)))))))...

Structure

-UG       U     UAA     gugu 
   CCUGCUG GCUGA   UCAGu    g
   ||||||| |||||   |||||    a
   GGACGAC UGACU   GGUcg    g
CAA       U     --C     auug 

Annotation confidence High

Genome context

Unknown

Mature ssa-miR-24a-4-5p

• Accession: MIMAT0032554
• Description: Salmo salar ssa-miR-24a-4-5p mature miRNA
• Sequence: 1 - UGCCUGCUGUGCUGAUAAUCAG - 22
• Evidence: experimental ; Illumina [1]

Mature ssa-miR-24a-3p

• Accession: MIMAT0032555
• Description: Salmo salar ssa-miR-24a-3p mature miRNA
• Sequence: 37 - UGGCUCAGUUCAGCAGGAAC - 56
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23865519
   Discovery and characterization of miRNA genes in Atlantic salmon (Salmo salar) by use of a deep sequencing approach
   Andreassen R, Worren MM, Høyheim B
   BMC Genomics (2013) 14:482