miRBase entry: mml-mir-24-2

Stem-loop mml-mir-24-2

Accession

MI0003053

Description

Macaca mulatta mml-mir-24-2 precursor miRNA mir-24

Gene
family?

RF00178; mir-24

Literature search

2 open access papers mention mml-mir-24-2
(3 sentences)

Sequence

2584822 reads, 3142.0 reads per million, 152 experiments

cucugccucccGUGCCUACUGAGCUGAAACACAGUugguuugugcacacUGGCUCAGUUCAGCAGGAACAGga
.......(((.((.(((.(((((((((....((((..((....))..))))..))))))))).))).)).)))

Structure

cucugcc   c  G   A         AACA    ug  u 
       ucc GU CCU CUGAGCUGA    CAGU  gu u
       ||| || ||| |||||||||    ||||  ||  
       agG CA GGA GACUUGACU    GUca  cg g
-------   A  A   C         --CG    ca  u

Annotation confidence High

Do you think this miRNA is real?

Comments

Berezikov et al. used primers designed from human miRNA gene flanking sequence to amplify miRNA precursor regions in primates [1]. The expression of the mature miRNA was not validated.

Genome context

19: 13435438-13435510 [-]

Clustered miRNAs

2 other miRNAs are < 10 kb from mml-mir-24-2

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature mml-miR-24-2-5p

Accession	MIMAT0051610
Description	Macaca mulatta mml-miR-24-2-5p mature miRNA
Sequence	12 - GUGCCUACUGAGCUGAAACACAGU - 35
Evidence	not_experimental

Mature mml-miR-24-3p

Accession	MIMAT0002337
Description	Macaca mulatta mml-miR-24-3p mature miRNA
Sequence	50 - UGGCUCAGUUCAGCAGGAACAG - 71
Evidence	not_experimental
Database links
Predicted targets

References

PubMed ID: 15652478
Phylogenetic shadowing and computational identification of human microRNA genes
"Berezikov E, Guryev V, van de Belt J, Wienholds E, Plasterk RH, Cuppen E"
"Cell (2005) 120:21-24