miRBase entry: mml-mir-24-2

Stem-loop mml-mir-24-2


Accession
MI0003053
Description
Macaca mulatta mml-mir-24-2 precursor miRNA mir-24
Gene
family?
RF00178; mir-24

Literature search
2 open access papers mention mml-mir-24-2
(3 sentences)

Sequence

497133 reads, 3530 reads per million, 8 experiments
cucugccucccgugccuacugagcugaaacacaguugguuugugcacacUGGCUCAGUUCAGCAGGAACAGga
.......(((.((.(((.(((((((((....((((..((....))..))))..))))))))).))).)).)))

Structure
cucugcc   c  g   a         aaca    ug  u 
       ucc gu ccu cugagcuga    cagu  gu u
       ||| || ||| |||||||||    ||||  ||  
       agG CA GGA GACUUGACU    GUca  cg g
-------   A  A   C         --CG    ca  u 


Annotation confidence Low
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Comments
Berezikov et al. used primers designed from human miRNA gene flanking sequence to amplify miRNA precursor regions in primates [1]. The expression of the mature miRNA was not validated.

Genome context
chr19: 13838860-13838932 [-]
Clustered miRNAs
2 other miRNAs are < 10 kb from mml-mir-24-2
Name Accession Chromosome Start End Strand Confidence




Database links

Mature mml-miR-24-3p

Accession MIMAT0002337
Description Macaca mulatta mml-miR-24-3p mature miRNA
Sequence 50 - UGGCUCAGUUCAGCAGGAACAG - 71
Evidence not_experimental
Database links
Predicted targets

References

  1. PubMed ID: 15652478
    Phylogenetic shadowing and computational identification of human microRNA genes
    "Berezikov E, Guryev V, van de Belt J, Wienholds E, Plasterk RH, Cuppen E"
    "Cell (2005) 120:21-24