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miRBase |
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Stem-loop sequence dre-mir-200b |
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Accession | MI0002038 (change log) | |||||||||
Description | Danio rerio miR-200b stem-loop | |||||||||
Gene family | MIPF0000019; mir-8 | |||||||||
Literature search |
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17 open access papers mention dre-mir-200b | |||||||||
Stem-loop |
c uc - g c uuuca 5' gguagu guc cauc uuac aggcag auugga u |||||| ||| |||| |||| |||||| |||||| u 3' ccgucg uag guag aaug uccguc uaaucu a u ua u g a uuuuc |
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Deep sequencing |
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Confidence |
Annotation confidence: high
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Genome context |
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Clustered miRNAs |
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Database links |
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Mature sequence dre-miR-200b-5p |
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Accession | MIMAT0031985 |
Sequence |
13 - caucuuacgaggcagcauugga - 34 |
Deep sequencing | 403 reads, 11 experiments |
Evidence | not experimental |
Database links |
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Mature sequence dre-miR-200b-3p |
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Accession | MIMAT0001862 |
Previous IDs | dre-miR-200b |
Sequence |
50 - uaauacugccugguaaugauga - 71 |
Deep sequencing | 41365 reads, 11 experiments |
Evidence | experimental; cloned [1] |
Database links |
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Predicted targets |
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References |
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1 |
PMID:15937218
"The developmental miRNA profiles of zebrafish as determined by small RNA cloning"
Genes Dev. 19:1288-1293(2005).
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