Stem-loop sequence ptc-MIR164c

AccessionMI0002214 (change log)
DescriptionPopulus trichocarpa miR164c stem-loop
Gene family MIPF0000045; MIR164
Literature search

8 open access papers mention ptc-MIR164c
(39 sentences)

Stem-loop 
   ua    u  c        ca             cucucu    
5'   gcuc ug uggagaag  gggcacgugcaag      ccu 
     |||| || ||||||||  |||||||||||||      || c
3'   uggg ac accucuuc  cucgugcacguuc      gga 
   --    u  a        cc             -cuuuc
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Confidence Annotation confidence: not enough data
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Genome context
Coordinates (Poptr2_0; GCA_000002775.2) Overlapping transcripts
CM000349.2: 945053-945134 [-]
intergenic
Database links

Mature sequence ptc-miR164c

Accession MIMAT0001920
Sequence

11 -  

uggagaagcagggcacgugca

 - 31

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Evidence experimental; cloned [1]

References

1
PMID:15994906 "Novel and mechanical stress-responsive MicroRNAs in Populus trichocarpa that are absent from Arabidopsis" Lu S, Sun YH, Shi R, Clark C, Li L, Chiang VL Plant Cell. 17:2186-2203(2005).
2
PMID:16973872 "The genome of black cottonwood, Populus trichocarpa (Torr. & Gray)" Tuskan GA, Difazio S, Jansson S, Bohlmann J, Grigoriev I, Hellsten U, Putnam N, Ralph S, Rombauts S, Salamov A, Schein J, Sterck L, Aerts A, Bhalerao RR, Bhalerao RP, Blaudez D, Boerjan W, Brun A, Brunner A, Busov V, Campbell M, Carlson J, Chalot M, Chapm Science. 313:1596-1604(2006).