Stem-loop sequence ptc-MIR166e

AccessionMI0002222 (change log)
DescriptionPopulus trichocarpa miR166e stem-loop
Gene family MIPF0000004; MIR166
Literature search

6 open access papers mention ptc-MIR166e
(23 sentences)

Stem-loop 
   uaac     a     u  uc           u        ugagaagcucaa 
5'     uguug gggga ug  gucugguucga gucauuca            a
       ||||| ||||| ||  ||||||||||| ||||||||            c
3'     acaac ccccu ac  cggaccaggcu uaguaagu            a
   -gua     c     u  uu           u        uauaaugcaaau
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Confidence Annotation confidence: not enough data
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Genome context
Coordinates (Poptr2_0; GCA_000002775.2) Overlapping transcripts
CM000341.2: 22785312-22785417 [-]
intergenic
Database links

Mature sequence ptc-miR166e

Accession MIMAT0001928
Sequence

77 -  

ucggaccaggcuucauucccc

 - 97

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Evidence by similarity; MI0000207

References

1
"Conservation and divergence of microRNA families in plants" Dezulian T, Palatnik JF, Huson DH, Weigel D http://genomebiology.com/2005/6/11/p13 (2005).
2
PMID:16973872 "The genome of black cottonwood, Populus trichocarpa (Torr. & Gray)" Tuskan GA, Difazio S, Jansson S, Bohlmann J, Grigoriev I, Hellsten U, Putnam N, Ralph S, Rombauts S, Salamov A, Schein J, Sterck L, Aerts A, Bhalerao RR, Bhalerao RP, Blaudez D, Boerjan W, Brun A, Brunner A, Busov V, Campbell M, Carlson J, Chalot M, Chapm Science. 313:1596-1604(2006).