Stem-loop sequence ptc-MIR167d

AccessionMI0002238 (change log)
DescriptionPopulus trichocarpa miR167d stem-loop
Gene family MIPF0000023; MIR167_1
Literature search

6 open access papers mention ptc-MIR167d
(50 sentences)

Stem-loop 
   ag    aa     a    - -c           u  uu      agaaggauagaag g 
5'   ggaa  gguga gcug c  agcaugaucua cu  gguuag             c a
     ||||  ||||| |||| |  ||||||||||| ||  ||||||             |  
3'   ccuu  ucacu cgac g  ucguacuggau ga  ccaauc             g a
   --    cc     c    a uc           c  uc      -----------aa a
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Confidence Annotation confidence: not enough data
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Genome context
Coordinates (Poptr2_0; GCA_000002775.2) Overlapping transcripts
CM000341.2: 22447920-22448024 [+]
intergenic
Database links

Mature sequence ptc-miR167d

Accession MIMAT0001944
Sequence

11 -  

ugaagcugccagcaugaucua

 - 31

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Evidence by similarity; MI0000209

References

1
"Conservation and divergence of microRNA families in plants" Dezulian T, Palatnik JF, Huson DH, Weigel D http://genomebiology.com/2005/6/11/p13 (2005).
2
PMID:16973872 "The genome of black cottonwood, Populus trichocarpa (Torr. & Gray)" Tuskan GA, Difazio S, Jansson S, Bohlmann J, Grigoriev I, Hellsten U, Putnam N, Ralph S, Rombauts S, Salamov A, Schein J, Sterck L, Aerts A, Bhalerao RR, Bhalerao RP, Blaudez D, Boerjan W, Brun A, Brunner A, Busov V, Campbell M, Carlson J, Chalot M, Chapm Science. 313:1596-1604(2006).