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miRBase |
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Stem-loop sequence ptc-MIR169n |
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Accession | MI0002264 (change log) |
Description | Populus trichocarpa miR169n stem-loop |
Gene family | MIPF0000037; MIR169_2 |
Literature search |
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9 open access papers mention ptc-MIR169n |
Stem-loop |
ag uuu a -a u augg c c a 5' agugga gagccaaggaug cuugccgc ga gc uccuug ug ug u |||||| |||||||||||| |||||||| || || |||||| || || 3' ucgcuu cuugguuccuac gaacggug uu ug gggaac au ac c -- ccu - gg u --gg c - a |
Confidence |
Annotation confidence: not enough data
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Database links |
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Mature sequence ptc-miR169n-5p |
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Accession | MIMAT0001970 |
Previous IDs | ptc-miR169n |
Sequence |
11 - ugagccaaggaugacuugccg - 31 |
Evidence | experimental; miRNAseq [2] |
Mature sequence ptc-miR169n-3p |
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Accession | MIMAT0022899 |
Sequence |
82 - gcaagcauccuugguucucc - 101 |
Evidence | experimental; miRNAseq [2] |
References |
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1 |
PMID:16973872
"The genome of black cottonwood, Populus trichocarpa (Torr. & Gray)"
Science. 313:1596-1604(2006).
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2 |
PMID:22442676
"Deep annotation of Populus trichocarpa microRNAs from diverse tissue sets"
PLoS One. 7:e33034(2012).
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