Stem-loop sequence ptc-MIR403a

AccessionMI0002350 (change log)
DescriptionPopulus trichocarpa miR403a stem-loop
Gene family MIPF0000290; MIR403
Literature search

2 open access papers mention ptc-MIR403a
(2 sentences)

Stem-loop 
   a    u   u ag        a            --a     aaaaaucccaucaaacacaaauuaaaau     aua  a 
5'  ggca auu c  guuugugc ugaaucuaauau   gcuaa                            acuag   gc a
    |||| ||| |  |||||||| ||||||||||||   |||||                            |||||   || u
3'  cugu uaa g  caaacacg acuuagauuaug   ugauu                            ugauc   cg c
   -    c   u cu        c            aua     ----------------------------     --a  a
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Confidence Annotation confidence: not enough data
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Genome context
Coordinates (Poptr2_0; GCA_000002775.2) Overlapping transcripts
CM000338.2: 15394788-15394919 [+]
intergenic
Database links

Mature sequence ptc-miR403a

Accession MIMAT0002056
Sequence

103 -  

uuagauucacgcacaaacucg

 - 123

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Evidence by similarity; MI0001072

References

1
PMID:15916721 "Identification and characterization of new plant microRNAs using EST analysis" Zhang BH, Pan XP, Wang QL, Cobb GP, Anderson TA Cell Res. 15:336-360(2005).
2
"Conservation and divergence of microRNA families in plants" Dezulian T, Palatnik JF, Huson DH, Weigel D http://genomebiology.com/2005/6/11/p13 (2005).
3
PMID:16973872 "The genome of black cottonwood, Populus trichocarpa (Torr. & Gray)" Tuskan GA, Difazio S, Jansson S, Bohlmann J, Grigoriev I, Hellsten U, Putnam N, Ralph S, Rombauts S, Salamov A, Schein J, Sterck L, Aerts A, Bhalerao RR, Bhalerao RP, Blaudez D, Boerjan W, Brun A, Brunner A, Busov V, Campbell M, Carlson J, Chalot M, Chapm Science. 313:1596-1604(2006).