Stem-loop sequence ptc-MIR403b

AccessionMI0002351 (change log)
DescriptionPopulus trichocarpa miR403b stem-loop
Gene family MIPF0000290; MIR403
Literature search

1 open access papers mention ptc-MIR403b
(1 sentences)

Stem-loop 
   acu  u   u u       u                 --cacaac   uc 
5'    ca auc c aguuugu cguggaucugacgccau        cgu  a
      || ||| | ||||||| |||||||||||||||||        |||  u
3'    gu uag g ucaaaca gcacuuagauugcggua        gca  u
   -cu  c   c c       c                 accuacca   cu
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Confidence Annotation confidence: not enough data
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Genome context
Coordinates (Poptr2_0; GCA_000002775.2) Overlapping transcripts
CM000346.2: 14828054-14828153 [-]
intergenic
Database links

Mature sequence ptc-miR403b

Accession MIMAT0002057
Sequence

71 -  

uuagauucacgcacaaacucg

 - 91

Get sequence
Evidence by similarity; MI0001072

References

1
PMID:15916721 "Identification and characterization of new plant microRNAs using EST analysis" Zhang BH, Pan XP, Wang QL, Cobb GP, Anderson TA Cell Res. 15:336-360(2005).
2
PMID:16973872 "The genome of black cottonwood, Populus trichocarpa (Torr. & Gray)" Tuskan GA, Difazio S, Jansson S, Bohlmann J, Grigoriev I, Hellsten U, Putnam N, Ralph S, Rombauts S, Salamov A, Schein J, Sterck L, Aerts A, Bhalerao RR, Bhalerao RP, Blaudez D, Boerjan W, Brun A, Brunner A, Busov V, Campbell M, Carlson J, Chalot M, Chapm Science. 313:1596-1604(2006).