Stem-loop sequence ptc-MIR477f

AccessionMI0002357 (change log)
DescriptionPopulus trichocarpa miR477f stem-loop
Gene family MIPF0000216; MIR477
Literature search

1 open access papers mention ptc-MIR477f
(1 sentences)

Stem-loop 
   -----u   c      -  uc        caac  agua   ag uac    au 
5'       gcu gcucuc cc  agggcuuc    gc    agc  g   gugc  g
         ||| |||||| ||  ||||||||    ||    |||  |   ||||   
3'       uga ugagag gg  uucuggag    cg    ucg  c   uacg  u
   aacuag   -      u  -u        --cu  gacg   cu uua    ac
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Confidence Annotation confidence: not enough data
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Genome context
Coordinates (Poptr2_0; GCA_000002775.2) Overlapping transcripts
CM000338.2: 12824973-12825072 [+]
intergenic
Database links

Mature sequence ptc-miR477f

Accession MIMAT0002063
Sequence

6 -  

gcucucccucagggcuucca

 - 25

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Evidence by similarity; MI0002356

References

1
PMID:15994906 "Novel and mechanical stress-responsive MicroRNAs in Populus trichocarpa that are absent from Arabidopsis" Lu S, Sun YH, Shi R, Clark C, Li L, Chiang VL Plant Cell. 17:2186-2203(2005).