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miRBase |
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Stem-loop sequence hsa-mir-505 |
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Accession | MI0003190 (change log) | ||||
Symbol | HGNC:MIR505 | ||||
Description | Homo sapiens miR-505 stem-loop | ||||
Gene family | MIPF0000217; mir-505 | ||||
Literature search |
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33 open access papers mention hsa-mir-505 | ||||
Stem-loop |
ac u g a ucug 5' gaugc ccag gggggagccag aagu uugauguu c ||||| |||| ||||||||||| |||| |||||||| c 3' cuacg gguc cuccuuugguc uuca aacugcga a -a u g c uuug |
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Deep sequencing |
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Confidence |
Annotation confidence: not enough data
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Comments |
The mature sequence shown here represents the most commonly cloned form from large-scale cloning studies [2]. The 5' end of the miRNA may be offset with respect to previous annotations. |
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Genome context |
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Database links |
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Mature sequence hsa-miR-505-5p |
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Accession | MIMAT0004776 |
Previous IDs | hsa-miR-505* |
Sequence |
15 - gggagccaggaaguauugaugu - 36 |
Deep sequencing | 7165 reads, 154 experiments |
Evidence | experimental; cloned [2] |
Database links |
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Predicted targets |
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Mature sequence hsa-miR-505-3p |
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Accession | MIMAT0002876 |
Previous IDs | hsa-miR-505 |
Sequence |
51 - cgucaacacuugcugguuuccu - 72 |
Deep sequencing | 28861 reads, 158 experiments |
Evidence | experimental; array-cloned [1], cloned [2-3] |
Database links |
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Predicted targets |
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References |
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1 |
PMID:15965474
"Identification of hundreds of conserved and nonconserved human microRNAs"
Nat Genet. 37:766-770(2005).
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2 |
PMID:17604727
"A mammalian microRNA expression atlas based on small RNA library sequencing"
Cell. 129:1401-1414(2007).
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3 |
PMID:17616659
"Patterns of known and novel small RNAs in human cervical cancer"
Cancer Res. 67:6031-6043(2007).
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