Stem-loop mmu-mir-369

Accession

MI0003535

Symbol

MGI: Mir369

Description

Mus musculus mmu-mir-369 precursor miRNA

Literature search

25 open access papers mention mmu-mir-369
(107 sentences)

Sequence

71288 reads, 677 reads per million, 89 experiments

gguacuugaagggAGAUCGACCGUGUUAUAUUCGCuuggcugacuucgAAUAAUACAUGGUUGAUCUUUucucaguauc
((((((.((.((((((((((((((((..((((((...((....)).))))))..)))))))))))))))).))))))))

Structure

      u  a                UA      Cuu  c 
gguacu ga gggAGAUCGACCGUGU  UAUUCG   gg u
|||||| || ||||||||||||||||  ||||||   ||  
cuauga cu uUUUCUAGUUGGUACA  AUAAgc   uc g
      -  c                UA      --u  a 

Annotation confidence High

Comments

The mature sequence shown here represents the most commonly cloned form from large-scale cloning studies [2].

Genome context

chr12: 109743418-109743496 [+]

Clustered miRNAs

13 other miRNAs are < 10 kb from mmu-mir-369

Mature mmu-miR-369-5p

• Accession: MIMAT0003185
• Description: Mus musculus mmu-miR-369-5p mature miRNA
• Sequence: 14 - AGAUCGACCGUGUUAUAUUCGC - 35
• Evidence: experimental ; cloned [1-2], Illumina [3-4]

Mature mmu-miR-369-3p

• Accession: MIMAT0003186
• Description: Mus musculus mmu-miR-369-3p mature miRNA
• Sequence: 49 - AAUAAUACAUGGUUGAUCUUU - 69
• Evidence: experimental ; cloned [1-2], Illumina [3-4]

References

1. PubMed ID: 17604727
   A mammalian microRNA expression atlas based on small RNA library sequencing
   "Landgraf P, Rusu M, Sheridan R, Sewer A, Iovino N, Aravin A, Pfeffer S, Rice A, Kamphorst AO, Landthaler M, Lin C, Socci ND, Hermida L, Fulci V, Chiaretti S, Foa R, Schliwka J, Fuchs U, Novosel A, Muller RU, Schermer B, Bissels U, Inman J, Phan Q, Chien M"
   "Cell (2007) 129:1401-1414


2. PubMed ID: 20215419
   MicroRNA transcriptome in the newborn mouse ovaries determined by massive parallel sequencing
   "Ahn HW, Morin RD, Zhao H, Harris RA, Coarfa C, Chen ZJ, Milosavljevic A, Marra MA, Rajkovic A"
   "Mol Hum Reprod (2010) 16:463-471


3. PubMed ID: 20413612
   Mammalian microRNAs: experimental evaluation of novel and previously annotated genes
   "Chiang HR, Schoenfeld LW, Ruby JG, Auyeung VC, Spies N, Baek D, Johnston WK, Russ C, Luo S, Babiarz JE, Blelloch R, Schroth GP, Nusbaum C, Bartel DP"
   "Genes Dev (2010) 24:992-1009


4. PubMed ID: 16274478
   Identification of clustered microRNAs using an ab initio prediction method
   Sewer A, Paul N, Landgraf P, Aravin A, Pfeffer S, Brownstein MJ, Tuschl T, van Nimwegen E, Zavolan M
   BMC Bioinformatics (2005) 6:267