miRBase entry: hsa-mir-320b-1

Stem-loop hsa-mir-320b-1


Accession
MI0003776
Symbol
HGNC: MIR320B1
Description
Homo sapiens hsa-mir-320b-1 precursor miRNA
Gene family
MIPF0000163; mir-320

Literature search
147 open access papers mention hsa-mir-320b-1
(531 sentences)

Sequence

1043741 reads, 3648 reads per million, 137 experiments
auaaauuaaucccucucuuucuaguucuuccuagagugaggAAAAGCUGGGUUGAGAGGGCAAacaaauuaa
..........(((((((..(((((((.(((((......))))).)))))))..)))))))............

Structure
--auaaauuaau       uu       c     ag 
            cccucuc  ucuaguu uuccu  a
            |||||||  ||||||| |||||   
            GGGAGAG  GGGUCGA AAgga  g
aauuaaacaAAC       UU       A     gu 


Annotation confidence Not enough data
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Genome context
chr1: 116671746-116671817 [+]

Database links

Mature hsa-miR-320b

Accession MIMAT0005792
Description Homo sapiens hsa-miR-320b mature miRNA
Sequence 42 - AAAAGCUGGGUUGAGAGGGCAA - 63
Evidence experimental
RAKE [1], Illumina [2-3]
Database links
Predicted targets

References

  1. PubMed ID: 16954537
    Many novel mammalian microRNA candidates identified by extensive cloning and RAKE analysis
    "Berezikov E, van Tetering G, Verheul M, van de Belt J, van Laake L, Vos J, Verloop R, van de Wetering M, Guryev V, Takada S, van Zonneveld AJ, Mano H, Plasterk R, Cuppen E"
    "Genome Res (2006) 16:1289-1298

  2. PubMed ID: 18392026
    Discovering microRNAs from deep sequencing data using miRDeep
    "Friedlander MR, Chen W, Adamidi C, Maaskola J, Einspanier R, Knespel S, Rajewsky N"
    "Nat Biotechnol (2008) 26:407-415