miRBase entry: 18392026

Discovering microRNAs from deep sequencing data using miRDeep

PubMed ID 18392026
Authors "Friedlander MR, Chen W, Adamidi C, Maaskola J, Einspanier R, Knespel S, Rajewsky N"
Journal "Nat Biotechnol
Volume 26
Pages 407-415

There are 224 miRNAs associated with this paper:
Name Accession RPM Chromosome Start End Strand Confidence
hsa-mir-320b-1 MI0003776 3648 chr1 116671746 116671817 + -
hsa-mir-320c-1 MI0003778 2360 chr18 21683518 21683589 + -
hsa-mir-320b-2 MI0003839 3661 chr1 224257040 224257110 - -
cel-mir-1817 MI0007979 40 chrI 10869370 10869474 - -
cel-mir-1820 MI0007982 83 chrIV 7767461 7767567 + High
cel-mir-1821 MI0007983 107 chrV 3042530 3042633 - -
cel-mir-1822 MI0007984 37 chrII 6015534 6015627 + High
cfa-mir-216b MI0007987 None chr10 56772853 56772914 - -
cfa-mir-33a MI0007988 None chr10 23456613 23456673 - -
cfa-let-7a-1 MI0007989 None chr10 20034319 20034387 - -
cfa-mir-26a-2 MI0007990 None chr10 1880513 1880572 - -
cfa-mir-1835 MI0007991 None chr10 27296054 27296114 + -
cfa-mir-32 MI0007992 None chr11 64197130 64197191 - -
cfa-mir-204 MI0007993 None chr1 86818494 86818553 + -
cfa-mir-31 MI0007994 None chr11 40904438 40904496 - -
cfa-mir-101-2 MI0007995 None chr1 93194328 93194382 + -
cfa-mir-371 MI0007996 None chr1 103406620 103406679 + -
cfa-mir-491 MI0007997 None chr11 40300967 40301020 + -
cfa-mir-150 MI0007998 None chr1 106998756 106998812 + -
cfa-mir-455 MI0007999 None chr11 68461911 68461968 + -
cfa-mir-30a MI0008000 None chr12 33783894 33783956 - -
cfa-mir-30c-2 MI0008001 None chr12 33757899 33757960 - -
cfa-mir-206 MI0008002 None chr12 19805523 19805582 + -
cfa-mir-99b MI0008003 None chr1 105400925 105400984 - -
cfa-let-7e MI0008004 None chr1 105400740 105400806 - -
cfa-mir-125a MI0008005 None chr1 105400273 105400332 - -
cfa-let-7f MI0008006 None chr1 97903931 97904008 - -
cfa-mir-219-1 MI0008007 None chr12 2670928 2670990 + -
cfa-mir-23b MI0008008 None chr1 71678353 71678406 - -
cfa-mir-27b MI0008009 None chr1 71678117 71678179 - -
cfa-mir-24-1 MI0008010 None chr1 71677608 71677669 - -
cfa-mir-151 MI0008011 None chr13 35353689 35353744 - -
cfa-mir-30d MI0008012 None chr13 30910306 30910365 - -
cfa-mir-30b MI0008013 None chr13 30906038 30906097 - -
cfa-mir-1836 MI0008014 None chr1 49030637 49030693 - -
cfa-mir-122 MI0008015 None chr1 17593858 17593915 - -
cfa-mir-196b MI0008016 None chr14 40344005 40344062 - -
cfa-mir-183 MI0008017 None chr14 7068542 7068603 + -
cfa-mir-148a MI0008018 None chr14 39301847 39301906 - -
cfa-mir-129-1 MI0008019 None chr14 8165110 8165174 - -
cfa-mir-335 MI0008020 None chr14 6444861 6444918 - -
cfa-mir-29b-1 MI0008021 None chr14 6184457 6184521 + -
cfa-mir-29a MI0008022 None chr14 6184844 6184903 + -
cfa-mir-30e MI0008023 None chr15 2283306 2283369 - -
cfa-mir-30c-1 MI0008024 None chr15 2280050 2280110 - -
cfa-mir-135a-2 MI0008025 None chr15 37181419 37181480 + -
cfa-mir-383 MI0008026 None chr16 38173722 38173783 - -
cfa-mir-1837-1 MI0008028 None chr17 21491603 21491661 - -
cfa-mir-130a MI0008029 None chr18 38543618 38543679 - -
cfa-mir-129-2 MI0008030 None chr18 26154534 26154596 - -
cfa-mir-192 MI0008031 None chr18 52281129 52281193 + -
cfa-mir-128-1 MI0008032 None chr19 38435956 38436011 + -
cfa-mir-7-1 MI0008033 None chr1 75509765 75509828 + -
cfa-mir-181c MI0008034 None chr20 48593343 48593403 - -
cfa-mir-181d MI0008035 None chr20 48593158 48593221 - -
cfa-let-7g MI0008036 None chr20 37501074 37501152 + -
cfa-mir-191 MI0008037 None chr20 40144135 40144198 + -
cfa-mir-425 MI0008038 None chr20 40144613 40144675 + -
cfa-mir-23a MI0008039 None chr20 48620335 48620386 + -
cfa-mir-27a MI0008040 None chr20 48620556 48620615 + -
cfa-mir-24-2 MI0008041 None chr20 48620684 48620745 + -
cfa-mir-199-1 MI0008042 None chr20 50410924 50410984 + -
cfa-mir-708 MI0008043 None chr21 19542577 19542645 + -
cfa-mir-1838 MI0008044 None chr21 20592019 20592076 + -
cfa-mir-139 MI0008045 None chr21 25597025 25597081 + -
cfa-mir-138b MI0008047 None chr2 59454083 59454151 - -
cfa-mir-15a MI0008048 None chr22 1846880 1846938 + -
cfa-mir-16-1 MI0008049 None chr22 1847020 1847084 + -
cfa-mir-17 MI0008050 None chr22 42478013 42478071 + -
cfa-mir-19a MI0008051 None chr22 42478298 42478355 + -
cfa-mir-20a MI0008052 None chr22 42478462 42478520 + -
cfa-mir-19b-1 MI0008054 None chr22 42478598 42478656 + -
cfa-mir-92a-1 MI0008055 None chr22 42478714 42478772 + -
cfa-mir-138a MI0008056 None chr23 2223136 2223197 - -
cfa-mir-128-2 MI0008057 None chr23 5826463 5826520 + -
cfa-mir-26a-1 MI0008058 None chr23 7747073 7747133 + -
cfa-mir-499 MI0008059 None chr24 24029549 24029607 + -
cfa-mir-1-1 MI0008060 None chr24 46481078 46481136 + -
cfa-mir-124-3 MI0008061 None chr24 46916732 46916789 + -
cfa-mir-124-1 MI0008062 None chr25 28188264 28188322 + -
cfa-mir-320 MI0008063 None chr25 35016676 35016729 + -
cfa-mir-130b MI0008064 None chr26 30924432 30924491 + -
cfa-mir-185 MI0008065 None chr26 29296014 29296069 - -
cfa-mir-1306 MI0008066 None chr26 29255671 29255728 - -
cfa-mir-196a-2 MI0008068 None chr27 1270718 1270776 - -
cfa-mir-148b MI0008069 None chr27 975146 975206 - -
cfa-mir-200c MI0008070 None chr27 38082097 38082159 - -
cfa-mir-1307 MI0008071 None chr28 15765927 15765986 - -
cfa-mir-107 MI0008072 None chr28 4484653 4484710 - -
cfa-mir-146b MI0008073 None chr28 14940550 14940610 + -
cfa-mir-124-2 MI0008074 None chr29 14264389 14264445 + -
cfa-mir-99a-1 MI0008075 None chr31 13258782 13258840 + -
cfa-let-7c MI0008076 None chr31 13259522 13259588 + -
cfa-mir-125b-2 MI0008077 None chr31 13304980 13305040 + -
cfa-mir-155 MI0008078 None chr31 21078768 21078828 + -
cfa-mir-218-1 MI0008079 None chr3 89044709 89044772 - -
cfa-mir-574 MI0008080 None chr3 73494062 73494119 - -
cfa-mir-9-2 MI0008081 None chr3 19997697 19997756 + -
cfa-mir-28 MI0008082 None chr34 20971517 20971578 + -
cfa-mir-15b MI0008083 None chr34 26460663 26460722 + -
cfa-mir-16-2 MI0008084 None chr34 26460807 26460871 + -
cfa-mir-7-2 MI0008085 None chr3 51802454 51802515 + -
cfa-mir-9-3 MI0008086 None chr3 52410840 52410900 + -
cfa-mir-1839 MI0008087 None chr3 54579692 54579764 + -
cfa-mir-26b MI0008088 None chr37 25054488 25054543 + -
cfa-mir-1840 MI0008089 None chr37 25734793 25734849 + -
cfa-mir-664 MI0008090 None chr38 14977030 14977090 - -
cfa-mir-194 MI0008091 None chr38 14895401 14895458 - -
cfa-mir-143 MI0008092 None chr4 59534535 59534589 - -
cfa-mir-378 MI0008093 None chr4 59276347 59276406 - -
cfa-mir-146a MI0008094 None chr4 50248597 50248654 - -
cfa-mir-1271 MI0008095 None chr4 36951021 36951078 - -
cfa-mir-1841 MI0008096 None chr4 8702838 8702897 - -
cfa-mir-218-2 MI0008097 None chr4 43010775 43010838 + -
cfa-mir-103-1 MI0008098 None chr4 43182876 43182937 + -
cfa-mir-328 MI0008099 None chr5 82166208 82166270 + -
cfa-mir-140 MI0008100 None chr5 79814256 79814316 - -
cfa-mir-34a MI0008101 None chr5 62485832 62485897 - -
cfa-mir-99a-2 MI0008102 None chr5 12047369 12047425 + -
cfa-mir-125b-1 MI0008103 None chr5 12097672 12097732 + -
cfa-mir-497 MI0008104 None chr5 32045759 32045825 - -
cfa-mir-195 MI0008105 None chr5 32045450 32045510 - -
cfa-mir-34c MI0008106 None chr5 21558106 21558160 - -
cfa-mir-101-1 MI0008107 None chr5 45184774 45184828 + -
cfa-mir-186 MI0008108 None chr6 74881615 74881675 + -
cfa-mir-106b MI0008109 None chr6 9498558 9498616 + -
cfa-mir-93 MI0008110 None chr6 9498780 9498840 + -
cfa-mir-25 MI0008111 None chr6 9498993 9499051 + -
cfa-mir-197 MI0008112 None chr6 42271719 42271779 - -
cfa-mir-193b MI0008113 None chr6 28878050 28878108 - -
cfa-mir-590 MI0008114 None chr6 6186538 6186598 - -
cfa-mir-1842 MI0008116 None chr6 38759035 38759094 + -
cfa-mir-137 MI0008117 None chr6 51640476 51640530 + -
cfa-mir-1-2 MI0008118 None chr7 66214380 66214438 + -
cfa-mir-92b MI0008119 None chr7 42338480 42338542 - -
cfa-mir-350 MI0008120 None chr7 34314838 34314894 - -
cfa-mir-29b-2 MI0008121 None chr7 6651878 6651943 - -
cfa-mir-29c-1 MI0008122 None chr7 6588010 6588067 - -
cfa-mir-1843 MI0008123 None chr7 23539367 23539426 + -
cfa-mir-199-2 MI0008124 None chr7 26812766 26812824 + -
cfa-mir-9-1 MI0008125 None chr7 41509404 41509465 + -
cfa-mir-181a-1 MI0008126 None chr7 4055465 4055526 + -
cfa-mir-181b-1 MI0008127 None chr7 4055651 4055712 + -
cfa-mir-342 MI0008128 None chr8 68424656 68424718 + -
cfa-mir-345 MI0008129 None chr8 68592447 68592506 + -
cfa-mir-493 MI0008130 None chr8 69094352 69094412 + -
cfa-mir-433 MI0008131 None chr8 69103838 69103911 + -
cfa-mir-127 MI0008132 None chr8 69104938 69104997 + -
cfa-mir-136 MI0008133 None chr8 69106615 69106670 + -
cfa-mir-379 MI0008134 None chr8 69253808 69253866 + -
cfa-mir-411 MI0008135 None chr8 69255094 69255151 + -
cfa-mir-380 MI0008136 None chr8 69256764 69256820 + -
cfa-mir-323 MI0008137 None chr8 69257494 69257549 + -
cfa-mir-329a MI0008138 None chr8 69258855 69258914 + -
cfa-mir-543 MI0008139 None chr8 69263406 69263463 + -
cfa-mir-495 MI0008140 None chr8 69265169 69265226 + -
cfa-mir-376a-3 MI0008141 None chr8 69269752 69269810 + -
cfa-mir-376a-2 MI0008142 None chr8 69270499 69270556 + -
cfa-mir-376a-1 MI0008143 None chr8 69271259 69271316 + -
cfa-mir-487b MI0008144 None chr8 69275496 69275553 + -
cfa-mir-382 MI0008145 None chr8 69283123 69283179 + -
cfa-mir-485 MI0008146 None chr8 69284239 69284297 + -
cfa-mir-409 MI0008147 None chr8 69293782 69293835 + -
cfa-mir-369 MI0008148 None chr8 69294073 69294128 + -
cfa-mir-410 MI0008149 None chr8 69294377 69294432 + -
cfa-mir-219-2 MI0008150 None chr9 55139107 55139171 + -
cfa-mir-199-3 MI0008151 None chr9 55262354 55262412 + -
cfa-mir-181a-2 MI0008152 None chr9 58302547 58302606 - -
cfa-mir-181b-2 MI0008153 None chr9 58301314 58301373 - -
cfa-mir-126 MI0008154 None chr9 48879438 48879496 - -
cfa-mir-212 MI0008155 None chr9 46153913 46153974 - -
cfa-mir-132 MI0008156 None chr9 46153531 46153590 - -
cfa-mir-22 MI0008157 None chr9 45852534 45852593 - -
cfa-mir-144 MI0008158 None chr9 43031035 43031094 - -
cfa-mir-193a MI0008159 None chr9 41316481 41316536 - -
cfa-mir-142 MI0008160 None chr9 32977393 32977455 - -
cfa-mir-10a MI0008161 None chr9 24842171 24842233 - -
cfa-mir-152 MI0008162 None chr9 24335161 24335219 - -
cfa-mir-338 MI0008163 None chr9 918652 918710 + -
cfa-mir-1844 MI0008164 None chr9 32760904 32760963 + -
cfa-mir-21 MI0008165 None chr9 34340550 34340609 + -
cfa-mir-423a MI0008166 None chr9 44155913 44155971 + -
cfa-mir-652 MI0008167 None chrX 83271857 83271919 + -
cfa-mir-224 MI0008168 None chrX 119925345 119925413 - -
cfa-mir-424 MI0008169 None chrX 105183437 105183493 - -
cfa-mir-503 MI0008170 None chrX 105183139 105183201 - -
cfa-mir-542 MI0008171 None chrX 105178359 105178417 - -
cfa-mir-450b MI0008172 None chrX 105177287 105177344 - -
cfa-mir-106a MI0008173 None chrX 104896518 104896574 - -
cfa-mir-19b-2 MI0008174 None chrX 104895962 104896025 - -
cfa-mir-92a-2 MI0008175 None chrX 104895826 104895886 - -
cfa-mir-363 MI0008176 None chrX 104895657 104895723 - -
cfa-mir-361 MI0008177 None chrX 66698698 66698760 - -
cfa-mir-384 MI0008178 None chrX 59390415 59390477 - -
cfa-mir-374a MI0008179 None chrX 57590394 57590445 - -
cfa-mir-374b MI0008180 None chrX 57550217 57550268 - -
cfa-mir-421 MI0008181 None chrX 57550055 57550110 - -
cfa-mir-98 MI0008182 None chrX 45253693 45253772 - -
cfa-mir-221 MI0008183 None chrX 39523890 39523951 - -
cfa-mir-532 MI0008184 None chrX 42774680 42774738 + -
cfa-mir-500 MI0008185 None chrX 42779872 42779930 + -
cfa-mir-660 MI0008186 None chrX 42783965 42784023 + -
cfa-mir-502 MI0008187 None chrX 42785601 42785659 + -
cfa-mir-676 MI0008188 None chrX 54495387 54495443 + -
cfa-let-7j MI0008189 None chrX 71568579 71568646 + -
hsa-mir-320d-1 MI0008190 603 chr13 40727816 40727887 - -
hsa-mir-320c-2 MI0008191 2364 chr18 24321675 24321746 + -
hsa-mir-320d-2 MI0008192 623 chrX 140926160 140926231 - -
hsa-mir-1825 MI0008193 0 chr20 32237795 32237847 + -
hsa-mir-1827 MI0008195 2 chr12 100189884 100189949 + -
cel-mir-1828 MI0008196 1 chrI 10600463 10600525 + -
cel-mir-1829a MI0008197 36 chrX 15588311 15588370 - -
cel-mir-1829b MI0008198 504 chrX 14977119 14977178 + High
cel-mir-1829c MI0008199 170 chrX 15236362 15236423 - High
cel-mir-1830 MI0008200 38 chrII 4371838 4371907 - High
cel-mir-1832a MI0008202 34 chrIII 11829248 11829311 + High
cel-mir-1833 MI0008203 0 chrIV 15012347 15012419 - -
cel-mir-58b MI0008204 12 chrIV 6660461 6660519 - -
cfa-mir-29c-2 MI0015960 None chr7 6651339 6651396 - -
cfa-mir-1837-2 MI0015961 None chr17 21620453 21620511 - -
cfa-mir-1837-3 MI0015962 None JH373785.1 7319 7377 + -
cfa-mir-1837-4 MI0015963 None None None -
cfa-mir-486 MI0008027 None chr16 23958963 23959026 - -
cfa-mir-339-1 MI0008115 None chr6 15853520 15853577 + -



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