Stem-loop cfa-let-7g

Accession

MI0008036

Description

Canis lupus familiaris cfa-let-7g precursor miRNA

Literature search

14 open access papers mention cfa-let-7g
(30 sentences)

Sequence

26012815 reads, 19950.0 reads per million, 82 experiments

UGAGGUAGUAGUUUGUACAGUUugagggucuaugauaccacccgguacaggagauaaCUGUACAGGCCACUGCCUUGCc
.((((((((.((((((((((((.....((((.((.((((....))))))..)))))))))))))))).))))))))...

Structure

--U        A            ugagg    -a  a    a 
   GAGGUAGU GUUUGUACAGUU     gucu  ug uacc c
   |||||||| ||||||||||||     ||||  || ||||  
   UUCCGUCA CGGACAUGUCaa     uaga  ac augg c
cCG        C            -----    gg  -    c 

Annotation confidence High

Genome context

20: 37851450-37851528 [+]

Mature cfa-let-7g-5p

• Accession: MIMAT0006637
• Description: Canis lupus familiaris cfa-let-7g-5p mature miRNA
• Sequence: 1 - UGAGGUAGUAGUUUGUACAGUU - 22
• Evidence: experimental ; Illumina [1]

Mature cfa-let-7g-3p

• Accession: MIMAT0051751
• Description: Canis lupus familiaris cfa-let-7g-3p mature miRNA
• Sequence: 58 - CUGUACAGGCCACUGCCUUGC - 78
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 18392026
   Discovering microRNAs from deep sequencing data using miRDeep
   "Friedlander MR, Chen W, Adamidi C, Maaskola J, Einspanier R, Knespel S, Rajewsky N"
   "Nat Biotechnol (2008) 26:407-415