miRBase entry: cfa-mir-503

Stem-loop cfa-mir-503

Accession

MI0008170

Description

Canis familiaris cfa-mir-503 precursor miRNA

Sequence

UAGCAGCGGGAACAGUACUGcagugggcaaucgguguucuggaguauuguuucugcugcccgg
..(((((((((((((((((.(((.(.((.....)).).))).)))))))))))))))))....

Structure

--UA                 G   u g  a 
    GCAGCGGGAACAGUACU cag g gc a
    ||||||||||||||||| ||| | || u
    cgucgucuuuguuauga guc u ug c
ggcc                 g   u g  g

Annotation confidence Not enough data

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Genome context

chrX: 105183139-105183201 [-]

Clustered miRNAs

4 other miRNAs are < 10 kb from cfa-mir-503

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature cfa-miR-503

Accession	MIMAT0006746
Description	Canis familiaris cfa-miR-503 mature miRNA
Sequence	1 - UAGCAGCGGGAACAGUACUG - 20
Evidence	experimental Illumina [1]

References

PubMed ID: 18392026
Discovering microRNAs from deep sequencing data using miRDeep
"Friedlander MR, Chen W, Adamidi C, Maaskola J, Einspanier R, Knespel S, Rajewsky N"
"Nat Biotechnol (2008) 26:407-415