miRBase entry: cfa-mir-329a

Stem-loop cfa-mir-329a

Accession

MI0008138

Description

Canis familiaris cfa-mir-329a precursor miRNA

Sequence

AGAGGUUUUCUGGGUUUCUGUUUcuuucaugaggaugaaacacacccaguuaaccucuuu
(((((((..((((((...((((((.(((....))).)))))).))))))..)))))))..

Structure

--       UU      UUC      u   a 
  AGAGGUU  CUGGGU   UGUUUc uuc u
  |||||||  ||||||   |||||| |||  
  ucuccaa  gaccca   acaaag agg g
uu       uu      --c      u   a

Annotation confidence Not enough data

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Genome context

chr8: 69258855-69258914 [+]

Clustered miRNAs

11 other miRNAs are < 10 kb from cfa-mir-329a

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature cfa-miR-329a

Accession	MIMAT0006719
Description	Canis familiaris cfa-miR-329a mature miRNA
Sequence	1 - AGAGGUUUUCUGGGUUUCUGUUU - 23
Evidence	experimental Illumina [1]

References

PubMed ID: 18392026
Discovering microRNAs from deep sequencing data using miRDeep
"Friedlander MR, Chen W, Adamidi C, Maaskola J, Einspanier R, Knespel S, Rajewsky N"
"Nat Biotechnol (2008) 26:407-415