Stem-loop cfa-mir-7-2

Accession

MI0008085

Description

Canis lupus familiaris cfa-mir-7-2 precursor miRNA

Sequence

4093634 reads, 2838.0 reads per million, 82 experiments

UGGAAGACUAGUGAUUUUGUUGUUgucucacugcauccaaCAACAAGUCCCAGUCUGCCACA
(((.(((((.(.(((((.(((((((............))))))))))))).))))).)))..

Structure

--   A     A U     U       ucuca 
  UGG AGACU G GAUUU GUUGUUg     c
  ||| ||||| | ||||| |||||||      
  ACC UCUGA C CUGAA CAACaac     u
AC   G     C -     -       cuacg 

Annotation confidence High

Genome context

3: 52222194-52222255 [+]

Mature cfa-miR-7-5p

• Accession: MIMAT0060782
• Description: Canis lupus familiaris cfa-miR-7-5p mature miRNA
• Sequence: 1 - UGGAAGACUAGUGAUUUUGUUGUU - 24
• Evidence: not_experimental

Mature cfa-miR-7-2-3p

• Accession: MIMAT0051747
• Description: Canis lupus familiaris cfa-miR-7-2-3p mature miRNA
• Sequence: 41 - CAACAAGUCCCAGUCUGCCACA - 62
• Evidence: not_experimental

References

1. PubMed ID: 18392026
   Discovering microRNAs from deep sequencing data using miRDeep
   "Friedlander MR, Chen W, Adamidi C, Maaskola J, Einspanier R, Knespel S, Rajewsky N"
   "Nat Biotechnol (2008) 26:407-415