miRBase entry: cfa-mir-497

Stem-loop cfa-mir-497

Accession

MI0008104

Description

Canis familiaris cfa-mir-497 precursor miRNA

Sequence

CAGCAGCACACUGUGGUUUGUacgguacuguggccacguccagaccacacugugguguuagggugag
.((((.((((.(((((((((.(((............))).))))))))).)))).))))........

Structure

-------C    G    C         U   guacu 
        AGCA CACA UGUGGUUUG acg     g
        |||| |||| ||||||||| |||      
        uugu gugu acaccagac ugc     u
gaguggga    g    c         c   accgg

Annotation confidence Not enough data

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Genome context

chr5: 32045759-32045825 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from cfa-mir-497

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature cfa-miR-497

Accession	MIMAT0006691
Description	Canis familiaris cfa-miR-497 mature miRNA
Sequence	1 - CAGCAGCACACUGUGGUUUGU - 21
Evidence	experimental Illumina [1]

References

PubMed ID: 18392026
Discovering microRNAs from deep sequencing data using miRDeep
"Friedlander MR, Chen W, Adamidi C, Maaskola J, Einspanier R, Knespel S, Rajewsky N"
"Nat Biotechnol (2008) 26:407-415