Stem-loop cfa-mir-9-2

Accession

MI0008081

Description

Canis lupus familiaris cfa-mir-9-2 precursor miRNA

Literature search

1 open access papers mention cfa-mir-9-2
(1 sentences)

Sequence

4873508 reads, 9544.0 reads per million, 82 experiments

UCUUUGGUUAUCUAGCUGUAUGAguguauuggucuucAUAAAGCUAGAUAACCGAAAGUa
..(((((((((((((((.((((((.(.......))))))).)))))))))))))))....

Structure

--UC               G      u ua 
    UUUGGUUAUCUAGCU UAUGAg g  u
    ||||||||||||||| |||||| |  u
    AAGCCAAUAGAUCGA AUAcuu c  g
aUGA               A      - ug 

Annotation confidence High

Genome context

3: 19906504-19906563 [+]

Mature cfa-miR-9-5p

• Accession: MIMAT0006674
• Description: Canis lupus familiaris cfa-miR-9-5p mature miRNA
• Sequence: 1 - UCUUUGGUUAUCUAGCUGUAUGA - 23
• Evidence: experimental ; Illumina [1]

Mature cfa-miR-9-3p

• Accession: MIMAT0051794
• Description: Canis lupus familiaris cfa-miR-9-3p mature miRNA
• Sequence: 38 - AUAAAGCUAGAUAACCGAAAGU - 59
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 18392026
   Discovering microRNAs from deep sequencing data using miRDeep
   "Friedlander MR, Chen W, Adamidi C, Maaskola J, Einspanier R, Knespel S, Rajewsky N"
   "Nat Biotechnol (2008) 26:407-415